Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11884 and 11885 are separated by 202 nucleotides11885 and 11886 are separated by 64 nucleotides11886 and 11887 are separated by 588 nucleotides11887 and 11888 are separated by 275 nucleotides mRNA_3516: 11884 - K01466 allB allantoinase, at 288,576 to 290,377 11884 mRNA_3517: 11885 - K06677 YCS4, CNAP1, CAPD2 condensin complex subunit 1, at 290,580 to 295,754 11885 mRNA_3518: 11886 - K12275 SEC62 translocation protein SEC62, at 295,819 to 296,849 11886 mRNA_3519: 11887 - KOG4686 Predicted sugar transporter, at 297,438 to 299,524 11887 mRNA_3520: 11888 - BLAST mannose-6-phosphate isomerase, class I [Kwoniella..., at 299,800 to 300,733 11888
Group Condition mRNA_3516 mRNA_3517 mRNA_3518 mRNA_3519 mRNA_3520
11884 11885 11886 11887 11888
growth on oleic acid YNB Glucose +0.2 N.D. N.D. +0.4 -1.3
facs on lipid accumulation Sorted High BODIPY Gate +0.5 N.D. N.D. +0.1 -1.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.6 N.D. N.D. -0.5 -0.7
ypd buoyancy 40 hrs No Buoyancy Separation +0.7 N.D. N.D. -0.3 -1.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 N.D. N.D. -0.0 +0.1
growth on ricinoleic acid YNB Glucose +1.0 N.D. N.D. -0.3 -0.8
growth on oleic acid YNB Oleic Acid +0.8 N.D. N.D. +0.2 -1.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 N.D. N.D. -0.1 +1.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 N.D. N.D. +0.1 +0.2
auxotrophy YNB Glucose 75mM Methionine +1.4 N.D. N.D. +0.0 -0.5
growth on ypd YPD +0.5 N.D. N.D. +0.1 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 N.D. N.D. +0.2 +0.5
ypd buoyancy 40 hrs Low Buoyancy +1.0 N.D. N.D. -0.0 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 N.D. N.D. +0.0 +1.0
facs on lipid accumulation Sorted No BODIPY Gate +0.5 N.D. N.D. +0.3 +0.4
auxotrophy YNB Glucose 75mM Arginine +1.7 N.D. N.D. +0.3 -0.8
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 N.D. N.D. +0.2 +0.7
auxotrophy Dropout Complete +1.2 N.D. N.D. +0.1 -0.0
ypd buoyancy 40 hrs Median Buoyancy +1.1 N.D. N.D. +0.3 +0.0
auxotrophy YNB Glucose +1.5 N.D. N.D. +0.2 +0.0
ypd buoyancy 40 hrs High Buoyancy +1.6 N.D. N.D. +0.1 +1.0
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