Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11888 and 11889 are separated by 1310 nucleotides11889 and 11890 are separated by 709 nucleotides11890 and 11891 are separated by 363 nucleotides11891 and 11892 are separated by 432 nucleotides mRNA_3520: 11888 - BLAST mannose-6-phosphate isomerase, class I [Kwoniella..., at 299,800 to 300,733 11888 mRNA_3521: 11889 - K02900 RP-L27Ae, RPL27A large subunit ribosomal protein L27Ae, at 302,044 to 303,082 11889 mRNA_3522: 11890 - K03008 RPB11, POLR2J DNA-directed RNA polymerase II subunit RPB11, at 303,792 to 304,536 11890 mRNA_3523: 11891 - K08064 NFYA nuclear transcription factor Y, alpha, at 304,900 to 306,087 11891 mRNA_3524: 11892 - Hypothetical Protein, at 306,520 to 307,367 11892
Group Condition mRNA_3520 mRNA_3521 mRNA_3522 mRNA_3523 mRNA_3524
11888 11889 11890 11891 11892
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 N.D. N.D. -0.9 +0.1
growth on oleic acid YNB Oleic Acid -1.0 N.D. N.D. -0.2 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -1.2 N.D. N.D. -0.4 +0.2
growth on oleic acid YNB Glucose -1.3 N.D. N.D. +0.3 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.7 N.D. N.D. -0.2 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +1.1 N.D. N.D. -2.0 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.8 N.D. N.D. -0.0 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 N.D. N.D. -0.9 +0.2
growth on ricinoleic acid YNB Glucose -0.8 N.D. N.D. +0.2 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.1 N.D. N.D. -0.2 -0.1
auxotrophy Dropout Complete -0.0 N.D. N.D. -0.2 +0.2
auxotrophy YNB Glucose 75mM Methionine -0.5 N.D. N.D. +0.4 -0.0
auxotrophy YNB Glucose +0.0 N.D. N.D. -0.1 -0.0
ypd buoyancy 40 hrs Median Buoyancy +0.0 N.D. N.D. -0.0 +0.1
growth on ypd YPD +0.3 N.D. N.D. -0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 N.D. N.D. -0.3 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.5 N.D. N.D. -0.5 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.4 N.D. N.D. +0.3 +0.2
ypd buoyancy 40 hrs High Buoyancy +1.0 N.D. N.D. +0.0 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +1.0 N.D. N.D. +0.3 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.7 N.D. N.D. +2.0 -0.1
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