Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11890 and 11891 are separated by 363 nucleotides11891 and 11892 are separated by 432 nucleotides11892 and 11893 are separated by 294 nucleotides11893 and 11894 are separated by 723 nucleotides mRNA_3522: 11890 - K03008 RPB11, POLR2J DNA-directed RNA polymerase II subunit RPB11, at 303,792 to 304,536 11890 mRNA_3523: 11891 - K08064 NFYA nuclear transcription factor Y, alpha, at 304,900 to 306,087 11891 mRNA_3524: 11892 - Hypothetical Protein, at 306,520 to 307,367 11892 mRNA_3525: 11893 - K08139 HXT MFS transporter, SP family, sugar-H+ symporter, at 307,662 to 311,002 11893 mRNA_3526: 11894 - K06666 TUP1 glucose repression regulatory protein TUP1, at 311,726 to 314,497 11894
Group Condition mRNA_3522 mRNA_3523 mRNA_3524 mRNA_3525 mRNA_3526
11890 11891 11892 11893 11894
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -2.0 +0.1 +0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.2 -0.1 -0.3 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.9 +0.1 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.5 +0.2 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.9 +0.2 +0.2 N.D.
growth on ypd YPD N.D. -0.2 -0.1 -0.3 N.D.
growth on oleic acid YNB Oleic Acid N.D. -0.2 -0.1 -0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.4 +0.2 -0.0 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.0 +0.1 -0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. +0.0 +0.2 -0.3 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.2 -0.0 +0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. -0.0 +0.1 -0.1 N.D.
auxotrophy YNB Glucose N.D. -0.1 -0.0 +0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.3 +0.2 +0.1 N.D.
auxotrophy Dropout Complete N.D. -0.2 +0.2 +0.1 N.D.
growth on oleic acid YNB Glucose N.D. +0.3 -0.0 -0.1 N.D.
growth on ricinoleic acid YNB Glucose N.D. +0.2 +0.2 -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. +0.4 -0.0 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.3 -0.0 +0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.3 +0.2 +0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +2.0 -0.1 -0.2 N.D.
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