Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11893 and 11894 are separated by 723 nucleotides11894 and 11895 are separated by 528 nucleotides11895 and 11896 are separated by 266 nucleotides11896 and 11897 are separated by 445 nucleotides mRNA_3525: 11893 - K08139 HXT MFS transporter, SP family, sugar-H+ symporter, at 307,662 to 311,002 11893 mRNA_3526: 11894 - K06666 TUP1 glucose repression regulatory protein TUP1, at 311,726 to 314,497 11894 mRNA_3527: 11895 - K08658 RCE1, FACE2 prenyl protein peptidase, at 315,026 to 316,520 11895 mRNA_3528: 11896 - Hypothetical Protein, at 316,787 to 317,613 11896 mRNA_3529: 11897 - Hypothetical Protein, at 318,059 to 319,264 11897
Group Condition mRNA_3525 mRNA_3526 mRNA_3527 mRNA_3528 mRNA_3529
11893 11894 11895 11896 11897
auxotrophy YNB Glucose 75mM Methionine +0.0 N.D. -0.4 +0.1 -0.5
auxotrophy YNB Glucose 75mM Arginine -0.1 N.D. -0.7 +0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.3 N.D. -0.5 +0.4 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.3 N.D. -0.2 +0.2 +0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. -0.4 +0.2 +0.1
auxotrophy Dropout Complete +0.1 N.D. -0.3 +0.4 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 N.D. +0.1 -0.3 +0.2
growth on oleic acid YNB Glucose -0.1 N.D. +0.1 +0.2 -0.2
auxotrophy YNB Glucose +0.1 N.D. -0.7 +0.6 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 N.D. -0.3 +0.1 +0.1
growth on ypd YPD -0.3 N.D. +0.3 -0.3 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 N.D. +0.1 -0.1 +0.3
growth on ricinoleic acid YNB Glucose -0.1 N.D. -0.1 +0.2 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 N.D. -0.1 -0.1 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. +0.2 -0.2 +0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.0 N.D. +0.0 +0.4 -0.0
growth on oleic acid YNB Oleic Acid -0.1 N.D. +0.3 +0.1 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 N.D. +0.2 +0.3 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 N.D. +0.5 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 N.D. +0.4 +0.3 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 N.D. +0.5 +0.2 +0.3
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