Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11897 and 11898 are separated by 614 nucleotides11898 and 11899 are separated by 1365 nucleotides11899 and 11900 are separated by 116 nucleotides11900 and 11901 are separated by 159 nucleotides mRNA_3529: 11897 - Hypothetical Protein, at 318,059 to 319,264 11897 mRNA_3530: 11898 - K14007 SEC24 protein transport protein SEC24, at 319,879 to 322,720 11898 mRNA_3531: 11899 - K00604 MTFMT, fmt methionyl-tRNA formyltransferase, at 324,086 to 325,765 11899 mRNA_3532: 11900 - K00670 NAA30, MAK3 N-alpha-acetyltransferase 30, at 325,882 to 326,936 11900 mRNA_3533: 11901 - K08337 ATG7 ubiquitin-like modifier-activating enzyme ATG7, at 327,096 to 329,991 11901
Group Condition mRNA_3529 mRNA_3530 mRNA_3531 mRNA_3532 mRNA_3533
11897 11898 11899 11900 11901
facs on lipid accumulation Sorted High BODIPY Gate -0.0 N.D. N.D. -0.0 -3.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 N.D. N.D. +0.0 -2.4
facs on lipid accumulation Sorted No BODIPY Gate +0.2 N.D. N.D. +0.0 -2.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 N.D. N.D. -0.5 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 N.D. N.D. +0.2 -0.5
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. N.D. -0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.5 N.D. N.D. +0.4 -0.0
ypd buoyancy 40 hrs Median Buoyancy +0.1 N.D. N.D. +0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.0 N.D. N.D. +0.0 +0.0
growth on ypd YPD +0.3 N.D. N.D. +0.2 -0.3
growth on ricinoleic acid YNB Glucose +0.1 N.D. N.D. +0.4 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 N.D. N.D. +0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 N.D. N.D. +0.5 +0.1
auxotrophy Dropout Complete -0.4 N.D. N.D. +0.7 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 N.D. N.D. +0.8 -0.2
auxotrophy YNB Glucose +0.0 N.D. N.D. +0.7 +0.2
growth on oleic acid YNB Glucose -0.2 N.D. N.D. +0.6 +0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 N.D. N.D. +0.4 +0.7
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 N.D. N.D. +0.5 +1.2
growth on oleic acid YNB Oleic Acid -0.0 N.D. N.D. +1.3 +0.7
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 N.D. N.D. +1.4 +0.4
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