Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11899 and 11900 are separated by 116 nucleotides11900 and 11901 are separated by 159 nucleotides11901 and 11902 are separated by 984 nucleotides11902 and 11903 are separated by 237 nucleotides mRNA_3531: 11899 - K00604 MTFMT, fmt methionyl-tRNA formyltransferase, at 324,086 to 325,765 11899 mRNA_3532: 11900 - K00670 NAA30, MAK3 N-alpha-acetyltransferase 30, at 325,882 to 326,936 11900 mRNA_3533: 11901 - K08337 ATG7 ubiquitin-like modifier-activating enzyme ATG7, at 327,096 to 329,991 11901 mRNA_3534: 11902 - Hypothetical Protein, at 330,976 to 331,488 11902 mRNA_3535: 11903 - HMMPfam-Protein of unknown function (DUF2419)-PF10343, at 331,726 to 332,711 11903
Group Condition mRNA_3531 mRNA_3532 mRNA_3533 mRNA_3534 mRNA_3535
11899 11900 11901 11902 11903
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.0 -2.4 -0.2 +0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.0 -3.1 +0.4 +0.4
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.5 -0.3 -1.0 -0.3
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.0 -2.1 +0.3 +0.4
growth on ypd YPD N.D. +0.2 -0.3 +0.0 -0.8
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 -0.1 -0.0 -0.5
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 -0.2 +0.1 -0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.2 -0.1 -0.4 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.2 -0.5 -0.0 +0.2
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.0 +0.0 +0.4 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.8 -0.2 +0.1 -0.2
growth on ricinoleic acid YNB Glucose N.D. +0.4 -0.1 +0.2 +0.2
auxotrophy YNB Glucose 75mM Arginine N.D. +0.5 +0.1 +0.7 -0.5
auxotrophy YNB Glucose 75mM Methionine N.D. +0.4 -0.0 +0.6 -0.1
auxotrophy Dropout Complete N.D. +0.7 +0.2 +0.1 -0.2
growth on oleic acid YNB Glucose N.D. +0.6 +0.6 +0.0 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.4 +0.7 +0.1 +0.0
auxotrophy YNB Glucose N.D. +0.7 +0.2 +0.5 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +1.4 +0.4 +0.4 -0.8
growth on oleic acid YNB Oleic Acid N.D. +1.3 +0.7 +0.0 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.5 +1.2 +0.3 +0.5
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