Fitness for 3 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 11902 and 11903 are separated by 237 nucleotides11903 and 11904 are separated by 582 nucleotides mRNA_3534: 11902 - Hypothetical Protein, at 330,976 to 331,488 11902 mRNA_3535: 11903 - HMMPfam-Protein of unknown function (DUF2419)-PF10343, at 331,726 to 332,711 11903 mRNA_3536: 11904 - ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 333,294 to 333,991 11904
Group Condition mRNA_3534 mRNA_3535 mRNA_3536
11902 11903 11904
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 -0.3 -0.4
growth on ypd YPD +0.0 -0.8 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.7 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.5 +0.1
growth on oleic acid YNB Glucose +0.0 -0.1 -0.2
growth on oleic acid YNB Oleic Acid +0.0 -0.2 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.1 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 -0.8 +0.4
ypd buoyancy 40 hrs Low Buoyancy +0.4 -0.5 +0.1
auxotrophy Dropout Complete +0.1 -0.2 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.1 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.7 -0.5 +0.2
auxotrophy YNB Glucose +0.5 -0.1 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.0 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.2 +0.5
growth on ricinoleic acid YNB Glucose +0.2 +0.2 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.2 +0.5
auxotrophy YNB Glucose 75mM Methionine +0.6 -0.1 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.3 +0.4 -0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.4 +0.4 +0.5
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 +0.5 +0.6
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