Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11907 and 11908 are separated by 384 nucleotides11908 and 11909 are separated by 185 nucleotides11909 and 11910 are separated by 256 nucleotides11910 and 11911 are separated by 209 nucleotides mRNA_3539: 11907 - K12663 ECH1 Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, at 4,641 to 6,092 11907 mRNA_3540: 11908 - K00784 rnz ribonuclease Z, at 6,477 to 8,169 11908 mRNA_3541: 11909 - K01754 E4.3.1.19, ilvA, tdcB threonine dehydratase, at 8,355 to 10,759 11909 mRNA_3542: 11910 - K01597 MVD, mvaD diphosphomevalonate decarboxylase, at 11,016 to 12,700 11910 mRNA_3543: 11911 - HMMPfam-MAGE family-PF01454, at 12,910 to 14,656 11911
Group Condition mRNA_3539 mRNA_3540 mRNA_3541 mRNA_3542 mRNA_3543
11907 11908 11909 11910 11911
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.5 -2.1 N.D. N.D.
growth on oleic acid YNB Oleic Acid -1.2 -0.6 -0.6 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.1 -1.9 N.D. N.D.
growth on oleic acid YNB Glucose -0.4 -0.2 -1.2 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.2 -1.4 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.5 -0.7 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.5 -0.6 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.0 -1.0 N.D. N.D.
auxotrophy Dropout Complete -0.3 -0.3 -0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +0.5 -1.3 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 -0.4 -0.3 N.D. N.D.
auxotrophy YNB Glucose -0.2 +0.1 -0.6 N.D. N.D.
growth on ricinoleic acid YNB Glucose +0.1 -0.1 -0.5 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.5 +0.2 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 -0.5 +0.1 N.D. N.D.
growth on ypd YPD -0.1 +0.1 -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.3 +0.0 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.1 +0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.4 +0.0 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.1 +0.6 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.1 +1.0 N.D. N.D.
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