Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11908 and 11909 are separated by 185 nucleotides11909 and 11910 are separated by 256 nucleotides11910 and 11911 are separated by 209 nucleotides11911 and 11912 are separated by 1141 nucleotides mRNA_3540: 11908 - K00784 rnz ribonuclease Z, at 6,477 to 8,169 11908 mRNA_3541: 11909 - K01754 E4.3.1.19, ilvA, tdcB threonine dehydratase, at 8,355 to 10,759 11909 mRNA_3542: 11910 - K01597 MVD, mvaD diphosphomevalonate decarboxylase, at 11,016 to 12,700 11910 mRNA_3543: 11911 - HMMPfam-MAGE family-PF01454, at 12,910 to 14,656 11911 mRNA_3544: 11912 - K03506 POLE4 DNA polymerase epsilon subunit 4, at 15,798 to 16,734 11912
Group Condition mRNA_3540 mRNA_3541 mRNA_3542 mRNA_3543 mRNA_3544
11908 11909 11910 11911 11912
facs on lipid accumulation Sorted High BODIPY Gate -0.5 -2.1 N.D. N.D. -1.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -1.9 N.D. N.D. -1.3
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -1.4 N.D. N.D. -0.4
growth on oleic acid YNB Glucose -0.2 -1.2 N.D. N.D. -0.6
auxotrophy YNB Glucose 75mM Methionine -0.5 -0.7 N.D. N.D. -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 +0.1 N.D. N.D. -0.2
auxotrophy YNB Glucose 75mM Arginine +0.0 -1.0 N.D. N.D. +0.4
growth on ricinoleic acid YNB Glucose -0.1 -0.5 N.D. N.D. +0.1
growth on oleic acid YNB Oleic Acid -0.6 -0.6 N.D. N.D. +0.7
auxotrophy Dropout Complete -0.3 -0.2 N.D. N.D. +0.1
auxotrophy YNB Glucose +0.1 -0.6 N.D. N.D. +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 -0.6 N.D. N.D. +0.7
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.2 N.D. N.D. -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 +0.2 N.D. N.D. +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.5 -1.3 N.D. N.D. +0.8
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 -0.3 N.D. N.D. +0.9
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 +0.0 N.D. N.D. -0.2
growth on ypd YPD +0.1 -0.1 N.D. N.D. +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 +0.0 N.D. N.D. +0.9
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.6 N.D. N.D. +0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 +1.0 N.D. N.D. -0.2
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