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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11915 and 11916 are separated by 244 nucleotides
11916 and 11917 are separated by 523 nucleotides
11917 and 11918 are separated by 446 nucleotides
11918 and 11919 are separated by 418 nucleotides
mRNA_3547: 11915 - K02973 RP-S23e, RPS23 small subunit ribosomal protein S23e, at 21,031 to 22,475
11915
mRNA_3548: 11916 - K19307 BMT5 25S rRNA (uracil2634-N3)-methyltransferase, at 22,720 to 24,408
11916
mRNA_3549: 11917 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 24,932 to 26,343
11917
mRNA_3550: 11918 - Hypothetical Protein, at 26,790 to 27,797
11918
mRNA_3551: 11919 - K10276 FBXL10_11, KDM2 F-box and leucine-rich repeat protein 10/11, at 28,216 to 30,545
11919
Group
Condition
mRNA
_3547
mRNA
_3548
mRNA
_3549
mRNA
_3550
mRNA
_3551
11915
11916
11917
11918
11919
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.4
+0.2
-0.7
-0.2
auxotrophy
YNB Glucose
N.D.
-0.3
+0.0
-0.3
-0.2
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.0
-0.1
-0.4
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.2
+0.3
-0.4
-0.4
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.0
+0.1
-0.6
-0.0
growth on ypd
YPD
N.D.
+0.3
-0.4
-0.2
-0.2
auxotrophy
Dropout Complete
N.D.
+0.2
-0.0
-0.1
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.2
+0.4
-0.4
-0.5
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.3
-0.2
-0.4
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.1
+0.0
-0.3
+0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.2
-0.0
-0.3
+0.1
growth on oleic acid
YNB Oleic Acid
N.D.
+0.3
+0.4
-0.1
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.3
+0.6
+0.1
-0.0
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.2
-0.1
+0.0
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.4
+0.2
-0.4
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.1
+0.6
+0.2
-0.4
growth on oleic acid
YNB Glucose
N.D.
+0.5
+0.6
-0.3
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.1
+0.4
-0.1
+0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.0
+0.6
+0.2
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.6
+0.4
+0.2
-0.2
growth on ricinoleic acid
YNB Glucose
N.D.
+0.1
+0.8
+0.4
+0.0
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