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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11916 and 11917 are separated by 523 nucleotides
11917 and 11918 are separated by 446 nucleotides
11918 and 11919 are separated by 418 nucleotides
11919 and 11920 are separated by 224 nucleotides
mRNA_3548: 11916 - K19307 BMT5 25S rRNA (uracil2634-N3)-methyltransferase, at 22,720 to 24,408
11916
mRNA_3549: 11917 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 24,932 to 26,343
11917
mRNA_3550: 11918 - Hypothetical Protein, at 26,790 to 27,797
11918
mRNA_3551: 11919 - K10276 FBXL10_11, KDM2 F-box and leucine-rich repeat protein 10/11, at 28,216 to 30,545
11919
mRNA_3552: 11920 - K10884 XRCC6, KU70, G22P1 ATP-dependent DNA helicase 2 subunit 1, at 30,770 to 33,816
11920
Group
Condition
mRNA
_3548
mRNA
_3549
mRNA
_3550
mRNA
_3551
mRNA
_3552
11916
11917
11918
11919
11920
auxotrophy
YNB Glucose 75mM Arginine
+0.0
+0.1
-0.6
-0.0
-0.4
auxotrophy
YNB Glucose
-0.3
+0.0
-0.3
-0.2
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
+0.2
-0.7
-0.2
+0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.1
-0.4
-0.3
-0.1
growth on ypd
YPD
+0.3
-0.4
-0.2
-0.2
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
+0.3
-0.4
-0.4
-0.0
auxotrophy
Dropout Complete
+0.2
-0.0
-0.1
-0.3
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
+0.4
-0.4
-0.5
+0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.3
-0.2
-0.4
+0.0
+0.1
growth on oleic acid
YNB Oleic Acid
+0.3
+0.4
-0.1
-0.4
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.4
+0.2
-0.4
+0.1
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
+0.0
-0.3
+0.1
+0.2
ypd buoyancy
40 hrs High Buoyancy
+0.2
-0.0
-0.3
+0.1
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
+0.4
-0.1
+0.4
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
+0.6
+0.1
-0.0
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.2
-0.1
+0.0
+0.2
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.6
+0.2
-0.4
+0.1
growth on oleic acid
YNB Glucose
+0.5
+0.6
-0.3
-0.2
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
+0.6
+0.2
+0.1
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
+0.6
+0.4
+0.2
-0.2
-0.0
growth on ricinoleic acid
YNB Glucose
+0.1
+0.8
+0.4
+0.0
+0.1
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