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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11917 and 11918 are separated by 446 nucleotides
11918 and 11919 are separated by 418 nucleotides
11919 and 11920 are separated by 224 nucleotides
11920 and 11921 are separated by 573 nucleotides
mRNA_3549: 11917 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 24,932 to 26,343
11917
mRNA_3550: 11918 - Hypothetical Protein, at 26,790 to 27,797
11918
mRNA_3551: 11919 - K10276 FBXL10_11, KDM2 F-box and leucine-rich repeat protein 10/11, at 28,216 to 30,545
11919
mRNA_3552: 11920 - K10884 XRCC6, KU70, G22P1 ATP-dependent DNA helicase 2 subunit 1, at 30,770 to 33,816
11920
mRNA_3553: 11921 - Hypothetical Protein, at 34,390 to 35,973
11921
Group
Condition
mRNA
_3549
mRNA
_3550
mRNA
_3551
mRNA
_3552
mRNA
_3553
11917
11918
11919
11920
11921
growth on ypd
YPD
-0.4
-0.2
-0.2
-0.3
-0.7
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.6
-0.0
-0.4
+0.2
growth on oleic acid
YNB Glucose
+0.6
-0.3
-0.2
-0.0
-0.8
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
-0.4
-0.4
-0.0
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.4
-0.3
-0.1
+0.3
auxotrophy
Dropout Complete
-0.0
-0.1
-0.3
-0.0
+0.1
growth on oleic acid
YNB Oleic Acid
+0.4
-0.1
-0.4
-0.1
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
-0.7
-0.2
+0.1
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
-0.4
+0.1
-0.3
-0.0
auxotrophy
YNB Glucose
+0.0
-0.3
-0.2
-0.1
+0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.4
+0.0
+0.1
+0.3
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.3
+0.1
+0.2
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.4
-0.4
-0.5
+0.2
+0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
-0.3
+0.1
+0.2
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.4
-0.1
+0.4
-0.4
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.6
+0.2
-0.4
+0.1
+0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.0
+0.2
+0.1
+0.3
ypd buoyancy
40 hrs No Buoyancy Separation
+0.4
+0.2
-0.2
-0.0
+0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.6
+0.2
+0.1
+0.0
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.6
+0.1
-0.0
+0.1
+0.6
growth on ricinoleic acid
YNB Glucose
+0.8
+0.4
+0.0
+0.1
+0.2
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