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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11918 and 11919 are separated by 418 nucleotides
11919 and 11920 are separated by 224 nucleotides
11920 and 11921 are separated by 573 nucleotides
11921 and 11922 are separated by 134 nucleotides
mRNA_3550: 11918 - Hypothetical Protein, at 26,790 to 27,797
11918
mRNA_3551: 11919 - K10276 FBXL10_11, KDM2 F-box and leucine-rich repeat protein 10/11, at 28,216 to 30,545
11919
mRNA_3552: 11920 - K10884 XRCC6, KU70, G22P1 ATP-dependent DNA helicase 2 subunit 1, at 30,770 to 33,816
11920
mRNA_3553: 11921 - Hypothetical Protein, at 34,390 to 35,973
11921
mRNA_3554: 11922 - KOG0254 Predicted transporter (major facilitator superfamily), at 36,108 to 36,965
11922
Group
Condition
mRNA
_3550
mRNA
_3551
mRNA
_3552
mRNA
_3553
mRNA
_3554
11918
11919
11920
11921
11922
growth on ypd
YPD
-0.2
-0.2
-0.3
-0.7
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
-0.4
-0.0
-0.1
-0.2
growth on oleic acid
YNB Glucose
-0.3
-0.2
-0.0
-0.8
+0.3
growth on oleic acid
YNB Oleic Acid
-0.1
-0.4
-0.1
-0.1
+0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.6
-0.0
-0.4
+0.2
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.7
-0.2
+0.1
+0.1
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
+0.4
-0.4
+0.1
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
+0.1
+0.2
+0.2
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
-0.5
+0.2
+0.4
+0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.4
-0.3
-0.1
+0.3
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
+0.1
-0.3
-0.0
+0.3
auxotrophy
YNB Glucose
-0.3
-0.2
-0.1
+0.4
+0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.4
+0.0
+0.1
+0.3
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.3
+0.1
+0.2
-0.0
+0.1
auxotrophy
Dropout Complete
-0.1
-0.3
-0.0
+0.1
+0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
-0.0
+0.1
+0.6
-0.5
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
-0.2
-0.0
+0.5
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
-0.4
+0.1
+0.1
+0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.2
+0.1
+0.3
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
+0.1
+0.0
+0.1
+0.3
growth on ricinoleic acid
YNB Glucose
+0.4
+0.0
+0.1
+0.2
+0.3
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