Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11918 and 11919 are separated by 418 nucleotides11919 and 11920 are separated by 224 nucleotides11920 and 11921 are separated by 573 nucleotides11921 and 11922 are separated by 134 nucleotides mRNA_3550: 11918 - Hypothetical Protein, at 26,790 to 27,797 11918 mRNA_3551: 11919 - K10276 FBXL10_11, KDM2 F-box and leucine-rich repeat protein 10/11, at 28,216 to 30,545 11919 mRNA_3552: 11920 - K10884 XRCC6, KU70, G22P1 ATP-dependent DNA helicase 2 subunit 1, at 30,770 to 33,816 11920 mRNA_3553: 11921 - Hypothetical Protein, at 34,390 to 35,973 11921 mRNA_3554: 11922 - KOG0254 Predicted transporter (major facilitator superfamily), at 36,108 to 36,965 11922
Group Condition mRNA_3550 mRNA_3551 mRNA_3552 mRNA_3553 mRNA_3554
11918 11919 11920 11921 11922
growth on ypd YPD -0.2 -0.2 -0.3 -0.7 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.4 -0.0 -0.1 -0.2
growth on oleic acid YNB Glucose -0.3 -0.2 -0.0 -0.8 +0.3
growth on oleic acid YNB Oleic Acid -0.1 -0.4 -0.1 -0.1 +0.0
auxotrophy YNB Glucose 75mM Arginine -0.6 -0.0 -0.4 +0.2 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.7 -0.2 +0.1 +0.1 +0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.4 -0.4 +0.1 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 +0.1 +0.2 +0.2 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 -0.5 +0.2 +0.4 +0.0
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.3 -0.1 +0.3 +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.4 +0.1 -0.3 -0.0 +0.3
auxotrophy YNB Glucose -0.3 -0.2 -0.1 +0.4 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.4 +0.0 +0.1 +0.3 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.3 +0.1 +0.2 -0.0 +0.1
auxotrophy Dropout Complete -0.1 -0.3 -0.0 +0.1 +0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.0 +0.1 +0.6 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.2 -0.0 +0.5 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.4 +0.1 +0.1 +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.2 +0.1 +0.3 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 +0.1 +0.0 +0.1 +0.3
growth on ricinoleic acid YNB Glucose +0.4 +0.0 +0.1 +0.2 +0.3
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