Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11919 and 11920 are separated by 224 nucleotides11920 and 11921 are separated by 573 nucleotides11921 and 11922 are separated by 134 nucleotides11922 and 11923 are separated by 570 nucleotides mRNA_3551: 11919 - K10276 FBXL10_11, KDM2 F-box and leucine-rich repeat protein 10/11, at 28,216 to 30,545 11919 mRNA_3552: 11920 - K10884 XRCC6, KU70, G22P1 ATP-dependent DNA helicase 2 subunit 1, at 30,770 to 33,816 11920 mRNA_3553: 11921 - Hypothetical Protein, at 34,390 to 35,973 11921 mRNA_3554: 11922 - KOG0254 Predicted transporter (major facilitator superfamily), at 36,108 to 36,965 11922 mRNA_3555: 11923 - Hypothetical Protein, at 37,536 to 38,312 11923
Group Condition mRNA_3551 mRNA_3552 mRNA_3553 mRNA_3554 mRNA_3555
11919 11920 11921 11922 11923
growth on ypd YPD -0.2 -0.3 -0.7 -0.3 -0.1
growth on oleic acid YNB Glucose -0.2 -0.0 -0.8 +0.3 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.0 -0.1 -0.2 +0.1
growth on oleic acid YNB Oleic Acid -0.4 -0.1 -0.1 +0.0 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.4 -0.4 +0.1 -0.4 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.4 +0.2 +0.2 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.0 +0.5 -0.3 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.2 +0.2 -0.5 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 +0.2 +0.4 +0.0 +0.0
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.1 +0.3 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 +0.1 +0.6 -0.5 +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.3 -0.0 +0.3 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 +0.1 +0.1 +0.3 +0.1
auxotrophy YNB Glucose -0.2 -0.1 +0.4 +0.1 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.0 +0.1 +0.3 -0.1 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.1 +0.1 +0.2 +0.0
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.2 -0.0 +0.1 -0.0
auxotrophy Dropout Complete -0.3 -0.0 +0.1 +0.6 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.1 +0.3 -0.2 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.0 +0.1 +0.3 +0.2
growth on ricinoleic acid YNB Glucose +0.0 +0.1 +0.2 +0.3 +0.1
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