Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11921 and 11922 are separated by 134 nucleotides
11922 and 11923 are separated by 570 nucleotides
11923 and 11924 are separated by 131 nucleotides
11924 and 11925 are separated by 628 nucleotides
mRNA_3553: 11921 - Hypothetical Protein, at 34,390 to 35,973
11921
mRNA_3554: 11922 - KOG0254 Predicted transporter (major facilitator superfamily), at 36,108 to 36,965
11922
mRNA_3555: 11923 - Hypothetical Protein, at 37,536 to 38,312
11923
mRNA_3556: 11924 - KOG0254 Predicted transporter (major facilitator superfamily), at 38,444 to 40,817
11924
mRNA_3557: 11925 - K01634 SGPL1, DPL1 sphinganine-1-phosphate aldolase, at 41,446 to 43,898
11925
Group
Condition
mRNA
_3553
mRNA
_3554
mRNA
_3555
mRNA
_3556
mRNA
_3557
11921
11922
11923
11924
11925
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
-0.4
-0.1
-0.7
-0.6
growth on ypd
YPD
-0.7
-0.3
-0.1
-0.1
+0.2
growth on oleic acid
YNB Glucose
-0.8
+0.3
-0.1
-0.2
-0.1
growth on oleic acid
YNB Oleic Acid
-0.1
+0.0
+0.1
-0.5
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.3
+0.2
-0.7
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.3
+0.1
-0.7
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.5
-0.3
-0.2
+0.1
-0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.3
-0.1
+0.0
+0.1
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.0
+0.1
-0.0
+0.0
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.3
-0.2
+0.1
-0.0
-0.1
growth on ricinoleic acid
YNB Glucose
+0.2
+0.3
+0.1
-0.1
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.2
+0.2
-0.1
-0.1
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
-0.5
+0.0
+0.2
+0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.2
+0.1
+0.3
+0.6
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
+0.3
+0.1
+0.5
-0.2
auxotrophy
YNB Glucose
+0.4
+0.1
+0.1
+0.0
+0.2
auxotrophy
Dropout Complete
+0.1
+0.6
+0.1
-0.2
+0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.3
+0.2
+0.1
-0.0
+0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.6
-0.5
+0.0
+0.2
+0.7
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.4
+0.0
+0.0
+0.4
+0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
+0.2
+0.0
+2.1
-0.2
remove
mRNA_3553
plot
remove
mRNA_3554
plot
remove
mRNA_3555
remove
mRNA_3556
plot
remove
mRNA_3557
plot