Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11922 and 11923 are separated by 570 nucleotides11923 and 11924 are separated by 131 nucleotides11924 and 11925 are separated by 628 nucleotides11925 and 11926 are separated by 163 nucleotides mRNA_3554: 11922 - KOG0254 Predicted transporter (major facilitator superfamily), at 36,108 to 36,965 11922 mRNA_3555: 11923 - Hypothetical Protein, at 37,536 to 38,312 11923 mRNA_3556: 11924 - KOG0254 Predicted transporter (major facilitator superfamily), at 38,444 to 40,817 11924 mRNA_3557: 11925 - K01634 SGPL1, DPL1 sphinganine-1-phosphate aldolase, at 41,446 to 43,898 11925 mRNA_3558: 11926 - K14808 DDX54, DBP10 ATP-dependent RNA helicase DDX54/DBP10, at 44,062 to 47,314 11926
Group Condition mRNA_3554 mRNA_3555 mRNA_3556 mRNA_3557 mRNA_3558
11922 11923 11924 11925 11926
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +0.2 -0.7 -0.1 -3.4
growth on ricinoleic acid YNB Glucose +0.3 +0.1 -0.1 -0.2 -3.6
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 +0.1 -0.7 +0.1 -2.1
growth on oleic acid YNB Glucose +0.3 -0.1 -0.2 -0.1 -1.8
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.1 -0.7 -0.6 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.3 +0.1 +0.5 -0.2 -2.1
growth on oleic acid YNB Oleic Acid +0.0 +0.1 -0.5 +0.2 -1.1
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.1 -0.1 +0.2 -1.4
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.0 +2.1 -0.2 -3.2
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.1 -0.0 -0.1 -0.7
growth on ypd YPD -0.3 -0.1 -0.1 +0.2 -0.5
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.0 +0.0 -0.1 -0.8
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.0 +0.1 -0.2 -0.5
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.1 -0.0 +0.4 -1.2
auxotrophy Dropout Complete +0.6 +0.1 -0.2 +0.3 -1.0
auxotrophy YNB Glucose +0.1 +0.1 +0.0 +0.2 -0.6
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.2 +0.1 -0.2 +0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 +0.0 +0.2 +0.7 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.1 +0.3 +0.6 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 +0.0 +0.2 +0.6 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.0 +0.4 +0.6 -0.2
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