Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11925 and 11926 are separated by 163 nucleotides11926 and 11927 are separated by 281 nucleotides11927 and 11928 are separated by 437 nucleotides11928 and 11929 are separated by 1520 nucleotides mRNA_3557: 11925 - K01634 SGPL1, DPL1 sphinganine-1-phosphate aldolase, at 41,446 to 43,898 11925 mRNA_3558: 11926 - K14808 DDX54, DBP10 ATP-dependent RNA helicase DDX54/DBP10, at 44,062 to 47,314 11926 mRNA_3559: 11927 - K18622 ADD adducin, at 47,596 to 49,033 11927 mRNA_3560: 11928 - K06101 ASH1L histone-lysine N-methyltransferase ASH1L, at 49,471 to 51,932 11928 mRNA_3561: 11929 - K06174 ABCE1, Rli1 ATP-binding cassette, sub-family E, member 1, at 53,453 to 55,273 11929
Group Condition mRNA_3557 mRNA_3558 mRNA_3559 mRNA_3560 mRNA_3561
11925 11926 11927 11928 11929
growth on ricinoleic acid YNB Glucose -0.2 -3.6 -0.2 -0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -3.4 +0.2 -0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -2.1 -1.2 -0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -3.2 +0.7 +0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.8 -0.9 -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.4 -1.2 -0.6 +0.0 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.2 -1.4 -0.2 +0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.5 -0.8 +0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.7 -0.4 +0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -2.1 +0.8 +0.4 N.D.
growth on oleic acid YNB Glucose -0.1 -1.8 +0.9 +0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.6 +0.2 +0.0 -0.0 N.D.
auxotrophy Dropout Complete +0.3 -1.0 +0.5 -0.2 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 +0.7 -0.7 +0.0 N.D.
auxotrophy YNB Glucose +0.2 -0.6 +0.1 +0.1 N.D.
growth on oleic acid YNB Oleic Acid +0.2 -1.1 +0.7 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.7 -0.3 +0.6 -0.5 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.6 -0.4 +0.9 +0.0 N.D.
growth on ypd YPD +0.2 -0.5 +2.3 -0.4 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.6 +0.3 +0.5 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.6 -0.2 +0.8 +0.5 N.D.
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