Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11927 and 11928 are separated by 437 nucleotides11928 and 11929 are separated by 1520 nucleotides11929 and 11930 are separated by 3825 nucleotides11930 and 11931 are separated by 2408 nucleotides mRNA_3559: 11927 - K18622 ADD adducin, at 47,596 to 49,033 11927 mRNA_3560: 11928 - K06101 ASH1L histone-lysine N-methyltransferase ASH1L, at 49,471 to 51,932 11928 mRNA_3561: 11929 - K06174 ABCE1, Rli1 ATP-binding cassette, sub-family E, member 1, at 53,453 to 55,273 11929 mRNA_3562: 11930 - KOG0017 FOG Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations, at 59,099 to 59,542 11930 mRNA_3563: 11931 - Hypothetical Protein, at 61,951 to 62,967 11931
Group Condition mRNA_3559 mRNA_3560 mRNA_3561 mRNA_3562 mRNA_3563
11927 11928 11929 11930 11931
growth on ricinoleic acid YNB Methylricinoleic Acid -1.2 -0.1 N.D. -0.6 +0.0
growth on ricinoleic acid YNB Glucose -0.2 -0.1 N.D. -0.3 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.9 -0.1 N.D. +0.2 +0.2
auxotrophy YNB Glucose 75mM Methionine -0.6 +0.0 N.D. +0.0 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.1 N.D. -0.2 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.8 +0.1 N.D. +0.2 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.4 +0.0 N.D. +0.2 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.1 N.D. +0.1 +0.2
auxotrophy YNB Glucose +0.1 +0.1 N.D. -0.0 +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.0 -0.0 N.D. +0.7 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.9 +0.0 N.D. -0.5 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.6 -0.5 N.D. +0.3 +0.3
growth on oleic acid YNB Oleic Acid +0.7 +0.2 N.D. +0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.5 +0.2 N.D. +0.0 +0.1
growth on oleic acid YNB Glucose +0.9 +0.1 N.D. +0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.7 +0.0 N.D. +0.6 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 +0.0 N.D. +1.4 +0.4
auxotrophy Dropout Complete +0.5 -0.2 N.D. +0.6 +0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.8 +0.4 N.D. +0.6 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.8 +0.5 N.D. +0.3 +0.0
growth on ypd YPD +2.3 -0.4 N.D. +0.3 -0.2
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