Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11929 and 11930 are separated by 3825 nucleotides11930 and 11931 are separated by 2408 nucleotides11931 and 11932 are separated by 616 nucleotides11932 and 11933 are separated by 427 nucleotides mRNA_3561: 11929 - K06174 ABCE1, Rli1 ATP-binding cassette, sub-family E, member 1, at 53,453 to 55,273 11929 mRNA_3562: 11930 - KOG0017 FOG Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations, at 59,099 to 59,542 11930 mRNA_3563: 11931 - Hypothetical Protein, at 61,951 to 62,967 11931 mRNA_3564: 11932 - Hypothetical Protein, at 63,584 to 64,390 11932 mRNA_3565: 11933 - KOG0254 Predicted transporter (major facilitator superfamily), at 64,818 to 67,834 11933
Group Condition mRNA_3561 mRNA_3562 mRNA_3563 mRNA_3564 mRNA_3565
11929 11930 11931 11932 11933
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.5 +0.1 +0.1 -1.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.3 +0.0 +0.2 -1.7
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.6 +0.0 +0.1 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.0 +0.1 +0.4 -1.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.2 -0.3 +0.1 -0.0
growth on oleic acid YNB Oleic Acid N.D. +0.1 -0.1 +0.1 -0.5
growth on oleic acid YNB Glucose N.D. +0.1 -0.1 +0.0 -0.4
growth on ricinoleic acid YNB Glucose N.D. -0.3 -0.0 +0.0 +0.1
auxotrophy YNB Glucose 75mM Methionine N.D. +0.0 -0.0 +0.1 -0.3
growth on ypd YPD N.D. +0.3 -0.2 -0.1 +0.2
auxotrophy YNB Glucose N.D. -0.0 +0.2 -0.0 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.3 +0.3 +0.2 -0.7
auxotrophy YNB Glucose 75mM Arginine N.D. +0.1 +0.2 +0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.7 -0.2 +0.1 -0.3
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.2 +0.1 +0.0 -0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.6 -0.3 +0.2 -0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.2 +0.1 +0.0 +0.2
ypd buoyancy 40 hrs High Buoyancy N.D. +0.2 +0.2 +0.2 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.6 -0.2 +0.3 +0.0
auxotrophy Dropout Complete N.D. +0.6 +0.3 +0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +1.4 +0.4 +0.1 +0.2
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