Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11930 and 11931 are separated by 2408 nucleotides11931 and 11932 are separated by 616 nucleotides11932 and 11933 are separated by 427 nucleotides11933 and 11934 are separated by 490 nucleotides mRNA_3562: 11930 - KOG0017 FOG Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations, at 59,099 to 59,542 11930 mRNA_3563: 11931 - Hypothetical Protein, at 61,951 to 62,967 11931 mRNA_3564: 11932 - Hypothetical Protein, at 63,584 to 64,390 11932 mRNA_3565: 11933 - KOG0254 Predicted transporter (major facilitator superfamily), at 64,818 to 67,834 11933 mRNA_3566: 11934 - HMMPfam-Opioid growth factor receptor (OGFr) conserved region-PF04664, at 68,325 to 69,478 11934
Group Condition mRNA_3562 mRNA_3563 mRNA_3564 mRNA_3565 mRNA_3566
11930 11931 11932 11933 11934
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 +0.1 +0.1 -1.3 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.0 +0.2 -1.7 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 +0.0 +0.1 -0.2 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +0.1 +0.4 -1.2 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.3 +0.1 -0.0 +0.1
growth on ypd YPD +0.3 -0.2 -0.1 +0.2 -0.3
growth on oleic acid YNB Glucose +0.1 -0.1 +0.0 -0.4 +0.1
growth on ricinoleic acid YNB Glucose -0.3 -0.0 +0.0 +0.1 +0.1
growth on oleic acid YNB Oleic Acid +0.1 -0.1 +0.1 -0.5 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.0 -0.0 +0.1 -0.3 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.2 +0.0 -0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.1 +0.0 +0.2 -0.4
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.1 +0.0 -0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.7 -0.2 +0.1 -0.3 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.6 -0.3 +0.2 -0.2 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.3 +0.2 -0.7 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.2 +0.2 -0.0 -0.1
auxotrophy YNB Glucose -0.0 +0.2 -0.0 -0.0 +0.4
auxotrophy Dropout Complete +0.6 +0.3 +0.1 -0.1 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.6 -0.2 +0.3 +0.0 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation +1.4 +0.4 +0.1 +0.2 -0.4
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