Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11931 and 11932 are separated by 616 nucleotides11932 and 11933 are separated by 427 nucleotides11933 and 11934 are separated by 490 nucleotides11934 and 11935 are separated by 567 nucleotides mRNA_3563: 11931 - Hypothetical Protein, at 61,951 to 62,967 11931 mRNA_3564: 11932 - Hypothetical Protein, at 63,584 to 64,390 11932 mRNA_3565: 11933 - KOG0254 Predicted transporter (major facilitator superfamily), at 64,818 to 67,834 11933 mRNA_3566: 11934 - HMMPfam-Opioid growth factor receptor (OGFr) conserved region-PF04664, at 68,325 to 69,478 11934 mRNA_3567: 11935 - KOG1760 Molecular chaperone Prefoldin, subunit 4, at 70,046 to 70,788 11935
Group Condition mRNA_3563 mRNA_3564 mRNA_3565 mRNA_3566 mRNA_3567
11931 11932 11933 11934 11935
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.2 -1.7 +0.4 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.1 -1.3 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.4 -1.2 +0.2 N.D.
growth on ypd YPD -0.2 -0.1 +0.2 -0.3 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.1 -0.3 +0.1 N.D.
growth on oleic acid YNB Glucose -0.1 +0.0 -0.4 +0.1 N.D.
growth on oleic acid YNB Oleic Acid -0.1 +0.1 -0.5 +0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.3 +0.2 -0.2 +0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.0 +0.2 -0.4 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 +0.1 -0.0 +0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.0 -0.0 -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.0 +0.1 -0.3 +0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.0 -0.1 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.2 -0.7 +0.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 +0.1 -0.2 +0.2 N.D.
growth on ricinoleic acid YNB Glucose -0.0 +0.0 +0.1 +0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 +0.1 +0.2 -0.4 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.2 -0.0 -0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.3 +0.0 +0.3 N.D.
auxotrophy Dropout Complete +0.3 +0.1 -0.1 +0.2 N.D.
auxotrophy YNB Glucose +0.2 -0.0 -0.0 +0.4 N.D.
remove
mRNA_3563
plot
remove
mRNA_3564
plot
remove
mRNA_3565
remove
mRNA_3566
plot
remove
mRNA_3567
plot