Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11933 and 11934 are separated by 490 nucleotides11934 and 11935 are separated by 567 nucleotides11935 and 11936 are separated by 180 nucleotides11936 and 11937 are separated by 238 nucleotides mRNA_3565: 11933 - KOG0254 Predicted transporter (major facilitator superfamily), at 64,818 to 67,834 11933 mRNA_3566: 11934 - HMMPfam-Opioid growth factor receptor (OGFr) conserved region-PF04664, at 68,325 to 69,478 11934 mRNA_3567: 11935 - KOG1760 Molecular chaperone Prefoldin, subunit 4, at 70,046 to 70,788 11935 mRNA_3568: 11936 - KOG4055 Uncharacterized conserved protein, at 70,969 to 72,030 11936 mRNA_3569: 11937 - BLAST rna recognition domain-containing protein [Colletotri..., at 72,269 to 75,186 11937
Group Condition mRNA_3565 mRNA_3566 mRNA_3567 mRNA_3568 mRNA_3569
11933 11934 11935 11936 11937
buoyancy on lipid accumulation 40 hrs Median Buoyancy -1.7 +0.4 N.D. N.D. +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.3 +0.1 N.D. N.D. +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.2 +0.2 N.D. N.D. +0.2
growth on oleic acid YNB Glucose -0.4 +0.1 N.D. N.D. -0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.1 N.D. N.D. -0.1
growth on oleic acid YNB Oleic Acid -0.5 +0.2 N.D. N.D. -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.7 +0.2 N.D. N.D. +0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.3 +0.1 N.D. N.D. -0.0
auxotrophy Dropout Complete -0.1 +0.2 N.D. N.D. -0.3
auxotrophy YNB Glucose 75mM Methionine -0.3 +0.1 N.D. N.D. +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.4 N.D. N.D. +0.2
growth on ypd YPD +0.2 -0.3 N.D. N.D. +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.2 N.D. N.D. -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.1 N.D. N.D. +0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.1 N.D. N.D. +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.4 N.D. N.D. +0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 +0.1 N.D. N.D. +0.0
growth on ricinoleic acid YNB Glucose +0.1 +0.1 N.D. N.D. -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.1 N.D. N.D. +0.3
auxotrophy YNB Glucose -0.0 +0.4 N.D. N.D. -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 +0.3 N.D. N.D. +0.0
remove
mRNA_3565
plot		 remove
mRNA_3566
plot		 remove
mRNA_3567		 remove
mRNA_3568
plot		 remove
mRNA_3569
plot