Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11934 and 11935 are separated by 567 nucleotides11935 and 11936 are separated by 180 nucleotides11936 and 11937 are separated by 238 nucleotides11937 and 11938 are separated by 89 nucleotides mRNA_3566: 11934 - HMMPfam-Opioid growth factor receptor (OGFr) conserved region-PF04664, at 68,325 to 69,478 11934 mRNA_3567: 11935 - KOG1760 Molecular chaperone Prefoldin, subunit 4, at 70,046 to 70,788 11935 mRNA_3568: 11936 - KOG4055 Uncharacterized conserved protein, at 70,969 to 72,030 11936 mRNA_3569: 11937 - BLAST rna recognition domain-containing protein [Colletotri..., at 72,269 to 75,186 11937 mRNA_3570: 11938 - HMMPfam-Eukaryotic aspartyl protease-PF00026,PRINTS-Pepsin (A1) aspartic protease family signature-PR00792,ProSitePatterns-Eukaryotic and viral aspartyl proteases active site.-PS00141,SUPERFAMILY--SSF50630, at 75,276 to 76,903 11938
Group Condition mRNA_3566 mRNA_3567 mRNA_3568 mRNA_3569 mRNA_3570
11934 11935 11936 11937 11938
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 N.D. N.D. +0.0 -0.8
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 N.D. N.D. -0.0 -0.6
growth on oleic acid YNB Glucose +0.1 N.D. N.D. -0.1 -0.5
auxotrophy YNB Glucose 75mM Arginine -0.1 N.D. N.D. -0.1 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 N.D. N.D. +0.0 -0.7
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. N.D. +0.1 -0.2
auxotrophy Dropout Complete +0.2 N.D. N.D. -0.3 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.1 N.D. N.D. -0.0 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 N.D. N.D. +0.3 +0.0
ypd buoyancy 40 hrs Median Buoyancy -0.4 N.D. N.D. +0.2 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 N.D. N.D. +0.2 -0.5
growth on ypd YPD -0.3 N.D. N.D. +0.1 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.1 N.D. N.D. +0.1 -0.2
growth on oleic acid YNB Oleic Acid +0.2 N.D. N.D. -0.0 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 N.D. N.D. +0.2 -0.4
growth on ricinoleic acid YNB Glucose +0.1 N.D. N.D. -0.0 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. N.D. +0.1 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 N.D. N.D. +0.1 +0.1
auxotrophy YNB Glucose +0.4 N.D. N.D. -0.1 +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. N.D. +0.3 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 N.D. N.D. +0.3 +0.1
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