Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11935 and 11936 are separated by 180 nucleotides11936 and 11937 are separated by 238 nucleotides11937 and 11938 are separated by 89 nucleotides11938 and 11939 are separated by 687 nucleotides mRNA_3567: 11935 - KOG1760 Molecular chaperone Prefoldin, subunit 4, at 70,046 to 70,788 11935 mRNA_3568: 11936 - KOG4055 Uncharacterized conserved protein, at 70,969 to 72,030 11936 mRNA_3569: 11937 - BLAST rna recognition domain-containing protein [Colletotri..., at 72,269 to 75,186 11937 mRNA_3570: 11938 - HMMPfam-Eukaryotic aspartyl protease-PF00026,PRINTS-Pepsin (A1) aspartic protease family signature-PR00792,ProSitePatterns-Eukaryotic and viral aspartyl proteases active site.-PS00141,SUPERFAMILY--SSF50630, at 75,276 to 76,903 11938 mRNA_3571: 11939 - K03681 RRP40, EXOSC3 exosome complex component RRP40, at 77,591 to 78,625 11939
Group Condition mRNA_3567 mRNA_3568 mRNA_3569 mRNA_3570 mRNA_3571
11935 11936 11937 11938 11939
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. +0.0 -0.8 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. +0.0 -0.7 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. -0.0 -0.6 N.D.
growth on oleic acid YNB Glucose N.D. N.D. -0.1 -0.5 N.D.
auxotrophy Dropout Complete N.D. N.D. -0.3 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. +0.2 -0.5 N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -0.0 -0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. -0.1 -0.2 N.D.
growth on oleic acid YNB Oleic Acid N.D. N.D. -0.0 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. +0.2 -0.4 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. +0.1 -0.2 N.D.
auxotrophy YNB Glucose N.D. N.D. -0.1 +0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. +0.1 -0.2 N.D.
growth on ricinoleic acid YNB Glucose N.D. N.D. -0.0 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. +0.1 +0.1 N.D.
growth on ypd YPD N.D. N.D. +0.1 +0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. +0.1 +0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. +0.2 +0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. +0.3 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. +0.3 +0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. +0.3 +0.1 N.D.
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