Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11943 and 11944 are separated by 468 nucleotides11944 and 11945 are separated by 997 nucleotides11945 and 11946 are separated by 370 nucleotides11946 and 11947 are separated by 150 nucleotides mRNA_3575: 11943 - Hypothetical Protein, at 86,235 to 86,923 11943 mRNA_3576: 11944 - Hypothetical Protein, at 87,392 to 87,994 11944 mRNA_3577: 11945 - K04567 KARS, lysS lysyl-tRNA synthetase, class II, at 88,992 to 92,589 11945 mRNA_3578: 11946 - HMMPfam-Glutathione-dependent formaldehyde-activating enzyme-PF04828,SUPERFAMILY--SSF51316, at 92,960 to 93,719 11946 mRNA_3579: 11947 - K16570 TUBGCP3, GCP3 gamma-tubulin complex component 3, at 93,870 to 96,029 11947
Group Condition mRNA_3575 mRNA_3576 mRNA_3577 mRNA_3578 mRNA_3579
11943 11944 11945 11946 11947
growth on oleic acid YNB Glucose -0.7 N.D. -0.5 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 N.D. -0.9 N.D. N.D.
growth on oleic acid YNB Oleic Acid -0.4 N.D. -0.4 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.2 N.D. -0.5 N.D. N.D.
auxotrophy YNB Glucose -0.5 N.D. -0.1 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.1 N.D. -0.4 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.2 N.D. -0.2 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 N.D. -0.1 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine -0.3 N.D. +0.1 N.D. N.D.
auxotrophy Dropout Complete -0.4 N.D. +0.3 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 N.D. -0.2 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine -0.6 N.D. +0.5 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 N.D. +0.1 N.D. N.D.
growth on ypd YPD -0.5 N.D. +0.6 N.D. N.D.
growth on ricinoleic acid YNB Glucose +0.2 N.D. +0.1 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.2 N.D. +0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.6 N.D. -0.1 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.6 N.D. -0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 N.D. +0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.7 N.D. +0.3 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 N.D. +0.5 N.D. N.D.
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