Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11944 and 11945 are separated by 997 nucleotides11945 and 11946 are separated by 370 nucleotides11946 and 11947 are separated by 150 nucleotides11947 and 11948 are separated by 1147 nucleotides mRNA_3576: 11944 - Hypothetical Protein, at 87,392 to 87,994 11944 mRNA_3577: 11945 - K04567 KARS, lysS lysyl-tRNA synthetase, class II, at 88,992 to 92,589 11945 mRNA_3578: 11946 - HMMPfam-Glutathione-dependent formaldehyde-activating enzyme-PF04828,SUPERFAMILY--SSF51316, at 92,960 to 93,719 11946 mRNA_3579: 11947 - K16570 TUBGCP3, GCP3 gamma-tubulin complex component 3, at 93,870 to 96,029 11947 mRNA_3580: 11948 - KOG0715 Molecular chaperone (DnaJ superfamily), at 97,177 to 97,844 11948
Group Condition mRNA_3576 mRNA_3577 mRNA_3578 mRNA_3579 mRNA_3580
11944 11945 11946 11947 11948
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.9 N.D. N.D. -2.4
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.5 N.D. N.D. -1.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.1 N.D. N.D. -1.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.1 N.D. N.D. -0.9
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.4 N.D. N.D. -0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.0 N.D. N.D. -0.5
ypd buoyancy 40 hrs High Buoyancy N.D. -0.2 N.D. N.D. -0.2
growth on oleic acid YNB Oleic Acid N.D. -0.4 N.D. N.D. -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.1 N.D. N.D. -0.3
growth on oleic acid YNB Glucose N.D. -0.5 N.D. N.D. +0.2
growth on ypd YPD N.D. +0.6 N.D. N.D. -0.8
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.1 N.D. N.D. -0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.2 N.D. N.D. +0.2
growth on ricinoleic acid YNB Glucose N.D. +0.1 N.D. N.D. -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.3 N.D. N.D. +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.5 N.D. N.D. +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.2 N.D. N.D. +0.6
auxotrophy Dropout Complete N.D. +0.3 N.D. N.D. +0.6
auxotrophy YNB Glucose N.D. -0.1 N.D. N.D. +1.3
auxotrophy YNB Glucose 75mM Methionine N.D. +0.1 N.D. N.D. +1.4
auxotrophy YNB Glucose 75mM Arginine N.D. +0.5 N.D. N.D. +1.0
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