Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11946 and 11947 are separated by 150 nucleotides11947 and 11948 are separated by 1147 nucleotides11948 and 11949 are separated by 79 nucleotides11949 and 11950 are separated by 293 nucleotides mRNA_3578: 11946 - HMMPfam-Glutathione-dependent formaldehyde-activating enzyme-PF04828,SUPERFAMILY--SSF51316, at 92,960 to 93,719 11946 mRNA_3579: 11947 - K16570 TUBGCP3, GCP3 gamma-tubulin complex component 3, at 93,870 to 96,029 11947 mRNA_3580: 11948 - KOG0715 Molecular chaperone (DnaJ superfamily), at 97,177 to 97,844 11948 mRNA_3581: 11949 - HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713, at 97,924 to 100,153 11949 mRNA_3582: 11950 - HMMPfam-Polycystin cation channel-PF08016, at 100,447 to 103,297 11950
Group Condition mRNA_3578 mRNA_3579 mRNA_3580 mRNA_3581 mRNA_3582
11946 11947 11948 11949 11950
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. -2.4 -0.0 +0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -1.2 -0.0 -0.1
growth on ypd YPD N.D. N.D. -0.8 -0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. -1.3 +0.3 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. -0.9 -0.1 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. -0.5 -0.0 +0.3
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. -0.2 +0.0 +0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. -0.2 +0.1 -0.0
growth on oleic acid YNB Oleic Acid N.D. N.D. -0.0 +0.1 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. -0.3 +0.3 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. +0.2 +0.2 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. +0.2 +0.2 -0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. -0.1 -0.1 +0.6
growth on oleic acid YNB Glucose N.D. N.D. +0.2 -0.0 +0.2
growth on ricinoleic acid YNB Glucose N.D. N.D. -0.1 +0.1 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. +0.6 +0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. +0.2 +0.3 +0.3
auxotrophy Dropout Complete N.D. N.D. +0.6 +0.1 +0.1
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. +1.0 -0.0 +0.2
auxotrophy YNB Glucose N.D. N.D. +1.3 +0.1 +0.1
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. +1.4 +0.1 +0.2
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