Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11948 and 11949 are separated by 79 nucleotides11949 and 11950 are separated by 293 nucleotides11950 and 11951 are separated by 788 nucleotides11951 and 11952 are separated by 299 nucleotides mRNA_3580: 11948 - KOG0715 Molecular chaperone (DnaJ superfamily), at 97,177 to 97,844 11948 mRNA_3581: 11949 - HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713, at 97,924 to 100,153 11949 mRNA_3582: 11950 - HMMPfam-Polycystin cation channel-PF08016, at 100,447 to 103,297 11950 mRNA_3583: 11951 - Hypothetical Protein, at 104,086 to 104,307 11951 mRNA_3584: 11952 - K00122 FDH formate dehydrogenase, at 104,607 to 106,241 11952
Group Condition mRNA_3580 mRNA_3581 mRNA_3582 mRNA_3583 mRNA_3584
11948 11949 11950 11951 11952
ypd buoyancy 40 hrs No Buoyancy Separation -2.4 -0.0 +0.1 N.D. -0.1
growth on ypd YPD -0.8 -0.2 -0.1 N.D. +0.3
facs on lipid accumulation Sorted High BODIPY Gate -1.2 -0.0 -0.1 N.D. +0.6
growth on ricinoleic acid YNB Methylricinoleic Acid -0.9 -0.1 +0.3 N.D. +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -1.3 +0.3 +0.3 N.D. +0.3
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.0 +0.0 N.D. -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.1 -0.0 N.D. -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -0.0 +0.3 N.D. +0.1
growth on oleic acid YNB Oleic Acid -0.0 +0.1 +0.0 N.D. +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.2 -0.1 N.D. -0.1
growth on ricinoleic acid YNB Glucose -0.1 +0.1 +0.4 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.2 -0.0 N.D. +0.2
growth on oleic acid YNB Glucose +0.2 -0.0 +0.2 N.D. +0.3
auxotrophy Dropout Complete +0.6 +0.1 +0.1 N.D. +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.1 +0.6 N.D. +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 +0.3 +0.2 N.D. +0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.6 +0.1 -0.1 N.D. +0.4
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.3 +0.3 N.D. +0.3
auxotrophy YNB Glucose 75mM Arginine +1.0 -0.0 +0.2 N.D. +0.1
auxotrophy YNB Glucose +1.3 +0.1 +0.1 N.D. -0.1
auxotrophy YNB Glucose 75mM Methionine +1.4 +0.1 +0.2 N.D. +0.3
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