Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11952 and 11953 are separated by 731 nucleotides11953 and 11954 are separated by 1442 nucleotides11954 and 11955 are separated by 181 nucleotides11955 and 11956 are separated by 244 nucleotides mRNA_3584: 11952 - K00122 FDH formate dehydrogenase, at 104,607 to 106,241 11952 mRNA_3585: 11953 - KOG1339 Aspartyl protease, at 106,973 to 108,703 11953 mRNA_3586: 11954 - HMMPfam-Membrane fusion protein Use1-PF09753, at 110,146 to 111,411 11954 mRNA_3587: 11955 - K12836 U2AF1 splicing factor U2AF 35 kDa subunit, at 111,593 to 112,967 11955 mRNA_3588: 11956 - KOG0254 Predicted transporter (major facilitator superfamily), at 113,212 to 115,744 11956
Group Condition mRNA_3584 mRNA_3585 mRNA_3586 mRNA_3587 mRNA_3588
11952 11953 11954 11955 11956
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.4 N.D. N.D. -0.2
auxotrophy Dropout Complete +0.1 -0.7 N.D. N.D. +0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.2 N.D. N.D. -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.2 N.D. N.D. -0.1
growth on oleic acid YNB Oleic Acid +0.2 -0.3 N.D. N.D. +0.2
growth on ypd YPD +0.3 -0.6 N.D. N.D. +0.3
auxotrophy YNB Glucose -0.1 +0.2 N.D. N.D. +0.1
growth on oleic acid YNB Glucose +0.3 -0.2 N.D. N.D. +0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +0.1 N.D. N.D. +0.1
growth on ricinoleic acid YNB Glucose +0.1 +0.1 N.D. N.D. +0.3
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.2 N.D. N.D. +0.1
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.5 N.D. N.D. +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.3 +0.5 N.D. N.D. +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.5 +0.3 N.D. N.D. +0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.6 +0.2 N.D. N.D. +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.8 N.D. N.D. +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +1.2 N.D. N.D. +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +1.0 N.D. N.D. +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 +0.8 N.D. N.D. +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.7 +1.2 N.D. N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +1.3 N.D. N.D. +0.6
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