Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11958 and 11959 are separated by 272 nucleotides11959 and 11960 are separated by 406 nucleotides11960 and 11961 are separated by 144 nucleotides11961 and 11962 are separated by 185 nucleotides mRNA_3590: 11958 - K02136 ATPeF1G, ATP5C1, ATP3 F-type H+-transporting ATPase subunit gamma, at 118,835 to 120,315 11958 mRNA_3591: 11959 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 120,588 to 122,766 11959 mRNA_3592: 11960 - KOG2664 Small nuclear RNA activating protein complex - 50kD subunit (SNAP50), at 123,173 to 125,228 11960 mRNA_3593: 11961 - K06978 K06978 uncharacterized protein, at 125,373 to 127,423 11961 mRNA_3594: 11962 - K01555 FAH, fahA fumarylacetoacetase, at 127,609 to 129,068 11962
Group Condition mRNA_3590 mRNA_3591 mRNA_3592 mRNA_3593 mRNA_3594
11958 11959 11960 11961 11962
auxotrophy YNB Glucose 75mM Arginine N.D. -0.6 N.D. -0.3 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.4 N.D. -0.5 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.1 N.D. -0.5 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.3 N.D. -0.3 -0.3
auxotrophy YNB Glucose 75mM Methionine N.D. -0.4 N.D. -0.2 -0.2
growth on oleic acid YNB Glucose N.D. -0.3 N.D. -0.3 -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 N.D. -0.3 -0.1
auxotrophy YNB Glucose N.D. -0.4 N.D. -0.1 -0.1
growth on oleic acid YNB Oleic Acid N.D. -0.3 N.D. -0.4 +0.1
auxotrophy Dropout Complete N.D. -0.1 N.D. -0.5 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.4 N.D. -0.2 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.0 N.D. -0.4 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.1 N.D. -0.4 +0.0
growth on ricinoleic acid YNB Glucose N.D. -0.5 N.D. -0.1 +0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.4 N.D. -0.4 -0.4
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.2 N.D. -0.0 -0.2
growth on ypd YPD N.D. -0.3 N.D. +0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 N.D. -0.1 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.6 N.D. +0.0 -0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.5 N.D. -0.1 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.2 N.D. +0.3 +0.8
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