Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11960 and 11961 are separated by 144 nucleotides11961 and 11962 are separated by 185 nucleotides11962 and 11963 are separated by 398 nucleotides11963 and 11964 are separated by 118 nucleotides mRNA_3592: 11960 - KOG2664 Small nuclear RNA activating protein complex - 50kD subunit (SNAP50), at 123,173 to 125,228 11960 mRNA_3593: 11961 - K06978 K06978 uncharacterized protein, at 125,373 to 127,423 11961 mRNA_3594: 11962 - K01555 FAH, fahA fumarylacetoacetase, at 127,609 to 129,068 11962 mRNA_3595: 11963 - K09838 ZEP, ABA1 zeaxanthin epoxidase, at 129,467 to 131,137 11963 mRNA_3596: 11964 - HMMPfam-Phytanoyl-CoA dioxygenase (PhyH)-PF05721,SUPERFAMILY--SSF51197, at 131,256 to 132,687 11964
Group Condition mRNA_3592 mRNA_3593 mRNA_3594 mRNA_3595 mRNA_3596
11960 11961 11962 11963 11964
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.4 -0.4 -0.5 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.5 -0.4 -0.9 +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.4 -0.1 -0.7 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.4 +0.0 -0.6 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.2 +0.0 -0.8 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.5 -0.2 -0.3 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.3 -0.3 -0.5 +0.4
auxotrophy YNB Glucose N.D. -0.1 -0.1 -0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.3 -0.1 -0.0 -0.2
auxotrophy YNB Glucose 75mM Methionine N.D. -0.2 -0.2 -0.1 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.0 -0.0 -0.8 +0.4
auxotrophy YNB Glucose 75mM Arginine N.D. -0.3 -0.2 +0.1 +0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.1 +0.2 -0.4 +0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.0 -0.2 +0.1 -0.1
auxotrophy Dropout Complete N.D. -0.5 +0.1 +0.2 +0.0
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 +0.1 +0.1 -0.1
growth on ypd YPD N.D. +0.2 -0.2 -0.0 +0.3
growth on oleic acid YNB Glucose N.D. -0.3 -0.1 +0.5 +0.3
growth on oleic acid YNB Oleic Acid N.D. -0.4 +0.1 +0.5 +0.3
growth on ricinoleic acid YNB Glucose N.D. -0.1 +0.1 +0.2 +0.4
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.3 +0.8 +0.6 -0.4
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