Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11961 and 11962 are separated by 185 nucleotides11962 and 11963 are separated by 398 nucleotides11963 and 11964 are separated by 118 nucleotides11964 and 11965 are separated by 179 nucleotides mRNA_3593: 11961 - K06978 K06978 uncharacterized protein, at 125,373 to 127,423 11961 mRNA_3594: 11962 - K01555 FAH, fahA fumarylacetoacetase, at 127,609 to 129,068 11962 mRNA_3595: 11963 - K09838 ZEP, ABA1 zeaxanthin epoxidase, at 129,467 to 131,137 11963 mRNA_3596: 11964 - HMMPfam-Phytanoyl-CoA dioxygenase (PhyH)-PF05721,SUPERFAMILY--SSF51197, at 131,256 to 132,687 11964 mRNA_3597: 11965 - K15562 BUR1, SGV1 serine/threonine-protein kinase BUR1, at 132,867 to 134,971 11965
Group Condition mRNA_3593 mRNA_3594 mRNA_3595 mRNA_3596 mRNA_3597
11961 11962 11963 11964 11965
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.1 -0.0 -0.2 -0.5
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.2 +0.1 -0.1 -1.0
growth on ypd YPD +0.2 -0.2 -0.0 +0.3 -1.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 -0.4 -0.9 +0.5 +0.5
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.2 -0.4 +0.1 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 -0.0 -0.8 +0.4 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.4 -0.5 -0.0 +0.9
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 -0.1 -0.7 +0.3 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.3 -0.5 +0.4 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 +0.0 -0.6 +0.1 +0.5
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.1 +0.1 -0.1 -0.0
auxotrophy YNB Glucose -0.1 -0.1 -0.2 -0.2 +0.6
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 -0.2 -0.3 +0.3 +0.7
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.2 -0.1 -0.0 +0.7
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.2 +0.1 +0.1 +0.7
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 +0.0 -0.8 +0.3 +1.2
growth on oleic acid YNB Glucose -0.3 -0.1 +0.5 +0.3 +0.5
auxotrophy Dropout Complete -0.5 +0.1 +0.2 +0.0 +1.2
growth on ricinoleic acid YNB Glucose -0.1 +0.1 +0.2 +0.4 +0.4
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 +0.8 +0.6 -0.4 -0.0
growth on oleic acid YNB Oleic Acid -0.4 +0.1 +0.5 +0.3 +1.2
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