Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11963 and 11964 are separated by 118 nucleotides11964 and 11965 are separated by 179 nucleotides11965 and 11966 are separated by 2287 nucleotides11966 and 11967 are separated by 217 nucleotides mRNA_3595: 11963 - K09838 ZEP, ABA1 zeaxanthin epoxidase, at 129,467 to 131,137 11963 mRNA_3596: 11964 - HMMPfam-Phytanoyl-CoA dioxygenase (PhyH)-PF05721,SUPERFAMILY--SSF51197, at 131,256 to 132,687 11964 mRNA_3597: 11965 - K15562 BUR1, SGV1 serine/threonine-protein kinase BUR1, at 132,867 to 134,971 11965 mRNA_3598: 11966 - KOG2652 RNA polymerase II transcription initiation factor TFIIA, large chain, at 137,259 to 138,295 11966 mRNA_3599: 11967 - K02134 ATPeF1D, ATP5D, ATP16 F-type H+-transporting ATPase subunit delta, at 138,513 to 139,861 11967
Group Condition mRNA_3595 mRNA_3596 mRNA_3597 mRNA_3598 mRNA_3599
11963 11964 11965 11966 11967
growth on ypd YPD -0.0 +0.3 -1.3 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.1 -1.0 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.4 +0.1 -0.6 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.8 +0.4 -0.4 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.2 -0.5 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.1 -0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.7 +0.3 +0.4 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.9 +0.5 +0.5 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 +0.1 +0.5 N.D. N.D.
auxotrophy YNB Glucose -0.2 -0.2 +0.6 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.6 -0.4 -0.0 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.5 -0.0 +0.9 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 +0.4 +0.4 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.0 +0.7 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.8 +0.3 +1.2 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.3 +0.7 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.1 +0.7 N.D. N.D.
growth on ricinoleic acid YNB Glucose +0.2 +0.4 +0.4 N.D. N.D.
growth on oleic acid YNB Glucose +0.5 +0.3 +0.5 N.D. N.D.
auxotrophy Dropout Complete +0.2 +0.0 +1.2 N.D. N.D.
growth on oleic acid YNB Oleic Acid +0.5 +0.3 +1.2 N.D. N.D.
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