Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11969 and 11970 are separated by 505 nucleotides11970 and 11971 are separated by 208 nucleotides11971 and 11972 are separated by 191 nucleotides11972 and 11973 are separated by 411 nucleotides mRNA_3601: 11969 - K11367 CHD1 chromodomain-helicase-DNA-binding protein 1, at 143,237 to 148,837 11969 mRNA_3602: 11970 - K10839 RAD23, HR23 UV excision repair protein RAD23, at 149,343 to 150,921 11970 mRNA_3603: 11971 - K13628 iscA, ISCA1 iron-sulfur cluster assembly protein, at 151,130 to 151,909 11971 mRNA_3604: 11972 - K10950 ERO1L ERO1-like protein alpha, at 152,101 to 154,380 11972 mRNA_3605: 11973 - K01872 AARS, alaS alanyl-tRNA synthetase, at 154,792 to 158,003 11973
Group Condition mRNA_3601 mRNA_3602 mRNA_3603 mRNA_3604 mRNA_3605
11969 11970 11971 11972 11973
buoyancy on lipid accumulation 40 hrs Low Buoyancy -2.6 -0.8 N.D. N.D. N.D.
growth on ypd YPD -2.9 -0.3 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -3.3 +0.2 N.D. N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -1.8 -0.7 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -2.5 +0.1 N.D. N.D. N.D.
growth on oleic acid YNB Glucose -2.3 +0.1 N.D. N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate -1.8 -0.4 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -2.0 +0.5 N.D. N.D. N.D.
growth on ricinoleic acid YNB Glucose -1.0 -0.3 N.D. N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy -0.7 -0.4 N.D. N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.9 +0.2 N.D. N.D. N.D.
auxotrophy YNB Glucose -0.6 -0.0 N.D. N.D. N.D.
growth on oleic acid YNB Oleic Acid -0.9 +0.3 N.D. N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.2 N.D. N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.3 -0.3 N.D. N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.1 N.D. N.D. N.D.
auxotrophy Dropout Complete -0.0 +0.2 N.D. N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.7 -0.3 N.D. N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.3 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine +0.6 -0.0 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine +0.5 +0.2 N.D. N.D. N.D.
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