Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 11975 and 11976 are separated by 665 nucleotides11976 and 11977 are separated by 375 nucleotides11977 and 11978 are separated by 878 nucleotides11978 and 11979 are separated by 98 nucleotides mRNA_3607: 11975 - BLAST putative transmembrane protein [Rhizoctonia solani 123E], at 159,428 to 160,353 11975 mRNA_3608: 11976 - Hypothetical Protein, at 161,019 to 162,088 11976 mRNA_3609: 11977 - K00235 SDHB, SDH2 succinate dehydrogenase (ubiquinone) iron-sulfur subunit, at 162,464 to 163,802 11977 mRNA_3610: 11978 - K09567 PPIH, CYPH peptidyl-prolyl isomerase H (cyclophilin H), at 164,681 to 165,477 11978 mRNA_3611: 11979 - Hypothetical Protein, at 165,576 to 165,896 11979
Group Condition mRNA_3607 mRNA_3608 mRNA_3609 mRNA_3610 mRNA_3611
11975 11976 11977 11978 11979
facs on lipid accumulation Sorted Low BODIPY Gate -1.8 -0.4 N.D. N.D. +0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.8 +0.1 N.D. N.D. -0.9
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.9 -0.0 N.D. N.D. -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.7 -0.1 N.D. N.D. -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 +0.1 N.D. N.D. -0.7
facs on lipid accumulation Sorted No BODIPY Gate -0.4 -0.2 N.D. N.D. -0.3
auxotrophy YNB Glucose 75mM Arginine -0.4 +0.1 N.D. N.D. -0.6
ypd buoyancy 40 hrs High Buoyancy -0.4 -0.1 N.D. N.D. -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.2 N.D. N.D. -0.3
auxotrophy YNB Glucose -0.2 -0.1 N.D. N.D. -0.4
auxotrophy Dropout Complete -0.2 -0.1 N.D. N.D. -0.3
growth on ricinoleic acid YNB Glucose -0.3 -0.2 N.D. N.D. +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 N.D. N.D. -0.2
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.1 N.D. N.D. -0.2
growth on oleic acid YNB Oleic Acid -0.0 +0.3 N.D. N.D. -0.4
growth on oleic acid YNB Glucose +0.0 +0.0 N.D. N.D. -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.1 N.D. N.D. -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.3 N.D. N.D. +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 +0.2 N.D. N.D. +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 +0.0 N.D. N.D. +0.0
growth on ypd YPD -0.1 +0.2 N.D. N.D. +0.6
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