Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11976 and 11977 are separated by 375 nucleotides11977 and 11978 are separated by 878 nucleotides11978 and 11979 are separated by 98 nucleotides11979 and 11980 are separated by 28 nucleotides mRNA_3608: 11976 - Hypothetical Protein, at 161,019 to 162,088 11976 mRNA_3609: 11977 - K00235 SDHB, SDH2 succinate dehydrogenase (ubiquinone) iron-sulfur subunit, at 162,464 to 163,802 11977 mRNA_3610: 11978 - K09567 PPIH, CYPH peptidyl-prolyl isomerase H (cyclophilin H), at 164,681 to 165,477 11978 mRNA_3611: 11979 - Hypothetical Protein, at 165,576 to 165,896 11979 mRNA_3612: 11980 - Hypothetical Protein, at 165,925 to 166,786 11980
Group Condition mRNA_3608 mRNA_3609 mRNA_3610 mRNA_3611 mRNA_3612
11976 11977 11978 11979 11980
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 N.D. N.D. -0.7 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 N.D. N.D. -0.3 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 N.D. N.D. -0.4 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 N.D. N.D. -0.9 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 N.D. N.D. -0.3 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. N.D. -0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. N.D. -0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 N.D. N.D. -0.3 +0.1
growth on oleic acid YNB Glucose +0.0 N.D. N.D. -0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. N.D. -0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.1 N.D. N.D. -0.6 +0.1
growth on ricinoleic acid YNB Glucose -0.2 N.D. N.D. +0.2 -0.1
auxotrophy Dropout Complete -0.1 N.D. N.D. -0.3 +0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.3 N.D. N.D. +0.1 +0.2
auxotrophy YNB Glucose -0.1 N.D. N.D. -0.4 +0.4
growth on oleic acid YNB Oleic Acid +0.3 N.D. N.D. -0.4 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.1 N.D. N.D. -0.2 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 N.D. N.D. +0.0 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 N.D. N.D. +0.0 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 N.D. N.D. +0.3 +0.5
growth on ypd YPD +0.2 N.D. N.D. +0.6 +0.1
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