Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11977 and 11978 are separated by 878 nucleotides
11978 and 11979 are separated by 98 nucleotides
11979 and 11980 are separated by 28 nucleotides
11980 and 11981 are separated by 144 nucleotides
mRNA_3609: 11977 - K00235 SDHB, SDH2 succinate dehydrogenase (ubiquinone) iron-sulfur subunit, at 162,464 to 163,802
11977
mRNA_3610: 11978 - K09567 PPIH, CYPH peptidyl-prolyl isomerase H (cyclophilin H), at 164,681 to 165,477
11978
mRNA_3611: 11979 - Hypothetical Protein, at 165,576 to 165,896
11979
mRNA_3612: 11980 - Hypothetical Protein, at 165,925 to 166,786
11980
mRNA_3613: 11981 - K09518 DNAJB12 DnaJ homolog subfamily B member 12, at 166,931 to 168,714
11981
Group
Condition
mRNA
_3609
mRNA
_3610
mRNA
_3611
mRNA
_3612
mRNA
_3613
11977
11978
11979
11980
11981
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
N.D.
-0.9
-0.0
-0.3
auxotrophy
YNB Glucose 75mM Arginine
N.D.
N.D.
-0.6
+0.1
-0.5
auxotrophy
YNB Glucose 75mM Methionine
N.D.
N.D.
-0.2
+0.1
-0.5
ypd buoyancy
40 hrs High Buoyancy
N.D.
N.D.
-0.2
-0.1
-0.2
auxotrophy
YNB Glucose
N.D.
N.D.
-0.4
+0.4
-0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
N.D.
-0.3
-0.4
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
N.D.
-0.3
-0.4
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
N.D.
-0.4
-0.3
+0.4
auxotrophy
Dropout Complete
N.D.
N.D.
-0.3
+0.3
-0.3
ypd buoyancy
40 hrs Median Buoyancy
N.D.
N.D.
-0.2
-0.2
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
N.D.
-0.7
-0.4
+0.8
ypd buoyancy
40 hrs Low Buoyancy
N.D.
N.D.
-0.2
-0.1
+0.1
growth on oleic acid
YNB Glucose
N.D.
N.D.
-0.2
-0.2
+0.4
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
N.D.
+0.1
+0.2
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
N.D.
-0.3
+0.1
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
N.D.
+0.0
-0.1
+0.3
growth on ricinoleic acid
YNB Glucose
N.D.
N.D.
+0.2
-0.1
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
N.D.
+0.0
-0.1
+0.3
growth on oleic acid
YNB Oleic Acid
N.D.
N.D.
-0.4
+0.1
+0.7
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
N.D.
+0.3
+0.5
-0.1
growth on ypd
YPD
N.D.
N.D.
+0.6
+0.1
+0.3
remove
mRNA_3609
plot
remove
mRNA_3610
plot
remove
mRNA_3611
remove
mRNA_3612
plot
remove
mRNA_3613
plot