Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11977 and 11978 are separated by 878 nucleotides11978 and 11979 are separated by 98 nucleotides11979 and 11980 are separated by 28 nucleotides11980 and 11981 are separated by 144 nucleotides mRNA_3609: 11977 - K00235 SDHB, SDH2 succinate dehydrogenase (ubiquinone) iron-sulfur subunit, at 162,464 to 163,802 11977 mRNA_3610: 11978 - K09567 PPIH, CYPH peptidyl-prolyl isomerase H (cyclophilin H), at 164,681 to 165,477 11978 mRNA_3611: 11979 - Hypothetical Protein, at 165,576 to 165,896 11979 mRNA_3612: 11980 - Hypothetical Protein, at 165,925 to 166,786 11980 mRNA_3613: 11981 - K09518 DNAJB12 DnaJ homolog subfamily B member 12, at 166,931 to 168,714 11981
Group Condition mRNA_3609 mRNA_3610 mRNA_3611 mRNA_3612 mRNA_3613
11977 11978 11979 11980 11981
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. -0.9 -0.0 -0.3
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. -0.6 +0.1 -0.5
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. -0.2 +0.1 -0.5
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. -0.2 -0.1 -0.2
auxotrophy YNB Glucose N.D. N.D. -0.4 +0.4 -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. -0.3 -0.4 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. -0.3 -0.4 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. -0.4 -0.3 +0.4
auxotrophy Dropout Complete N.D. N.D. -0.3 +0.3 -0.3
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. -0.2 -0.2 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. -0.7 -0.4 +0.8
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. -0.2 -0.1 +0.1
growth on oleic acid YNB Glucose N.D. N.D. -0.2 -0.2 +0.4
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. +0.1 +0.2 -0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. -0.3 +0.1 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. +0.0 -0.1 +0.3
growth on ricinoleic acid YNB Glucose N.D. N.D. +0.2 -0.1 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. +0.0 -0.1 +0.3
growth on oleic acid YNB Oleic Acid N.D. N.D. -0.4 +0.1 +0.7
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. +0.3 +0.5 -0.1
growth on ypd YPD N.D. N.D. +0.6 +0.1 +0.3
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