Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11983 and 11984 are separated by 364 nucleotides11984 and 11985 are separated by 748 nucleotides11985 and 11986 are separated by 676 nucleotides11986 and 11987 are separated by 288 nucleotides mRNA_3615: 11983 - KOG3223 Uncharacterized conserved protein, at 171,403 to 172,846 11983 mRNA_3616: 11984 - K11600 RRP41, EXOSC4, SKI6 exosome complex component RRP41, at 173,211 to 174,376 11984 mRNA_3617: 11985 - KOG0254 Predicted transporter (major facilitator superfamily), at 175,125 to 177,580 11985 mRNA_3618: 11986 - HMMPfam-Cupin domain-PF07883,SUPERFAMILY--SSF51182, at 178,257 to 178,945 11986 mRNA_3619: 11987 - HMMPfam-X-Pro dipeptidyl-peptidase (S15 family)-PF02129,HMMPfam-X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain-PF08530,SMART-X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain-SM00939,SUPERFAMILY--SSF49785,SUPERFAMILY--SSF53474,TIGRFAM-/NonD hydrolase CocE/NonD family protein-TIGR00976, at 179,234 to 181,455 11987
Group Condition mRNA_3615 mRNA_3616 mRNA_3617 mRNA_3618 mRNA_3619
11983 11984 11985 11986 11987
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. -0.1 -0.1 -0.9
growth on oleic acid YNB Glucose N.D. N.D. -0.1 -0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. +0.6 +0.1 -0.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. -0.2 +0.5 -0.4
auxotrophy Dropout Complete N.D. N.D. +0.3 +0.1 -0.5
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. +0.2 -0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. -0.1 +0.1 -0.0
growth on ypd YPD N.D. N.D. -0.3 +0.5 -0.0
auxotrophy YNB Glucose N.D. N.D. +0.5 +0.1 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. -0.4 +0.5 +0.1
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. +0.1 -0.2 +0.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. +0.5 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. -0.1 +0.5 -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. +0.1 +0.0 +0.3
growth on oleic acid YNB Oleic Acid N.D. N.D. +0.4 -0.3 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. +0.2 +0.6 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. -0.1 +0.3 +0.3
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. +0.8 +0.2 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. -0.2 +0.4 +0.4
growth on ricinoleic acid YNB Glucose N.D. N.D. -0.0 +0.5 +0.7
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. +0.7 -0.4 +1.1
remove
mRNA_3615
plot
remove
mRNA_3616
plot
remove
mRNA_3617
remove
mRNA_3618
plot
remove
mRNA_3619
plot