Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11984 and 11985 are separated by 748 nucleotides11985 and 11986 are separated by 676 nucleotides11986 and 11987 are separated by 288 nucleotides11987 and 11988 are separated by 306 nucleotides mRNA_3616: 11984 - K11600 RRP41, EXOSC4, SKI6 exosome complex component RRP41, at 173,211 to 174,376 11984 mRNA_3617: 11985 - KOG0254 Predicted transporter (major facilitator superfamily), at 175,125 to 177,580 11985 mRNA_3618: 11986 - HMMPfam-Cupin domain-PF07883,SUPERFAMILY--SSF51182, at 178,257 to 178,945 11986 mRNA_3619: 11987 - HMMPfam-X-Pro dipeptidyl-peptidase (S15 family)-PF02129,HMMPfam-X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain-PF08530,SMART-X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain-SM00939,SUPERFAMILY--SSF49785,SUPERFAMILY--SSF53474,TIGRFAM-/NonD hydrolase CocE/NonD family protein-TIGR00976, at 179,234 to 181,455 11987 mRNA_3620: 11988 - K15777 DOPA 4,5-DOPA dioxygenase extradiol, at 181,762 to 183,020 11988
Group Condition mRNA_3616 mRNA_3617 mRNA_3618 mRNA_3619 mRNA_3620
11984 11985 11986 11987 11988
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.1 -0.1 -0.9 -0.3
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.1 +0.1 -0.0 -0.3
growth on oleic acid YNB Glucose N.D. -0.1 -0.1 -0.2 +0.2
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.5 -0.0 -0.2 -0.3
growth on ypd YPD N.D. -0.3 +0.5 -0.0 -0.2
auxotrophy Dropout Complete N.D. +0.3 +0.1 -0.5 -0.0
auxotrophy YNB Glucose N.D. +0.5 +0.1 -0.5 -0.1
auxotrophy YNB Glucose 75mM Methionine N.D. +0.6 +0.1 -0.8 +0.2
ypd buoyancy 40 hrs High Buoyancy N.D. +0.1 -0.2 +0.3 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.2 +0.5 -0.4 +0.3
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.2 -0.1 -0.1 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.4 +0.5 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.1 +0.5 -0.1 +0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 +0.0 +0.3 -0.0
growth on oleic acid YNB Oleic Acid N.D. +0.4 -0.3 +0.2 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.1 +0.3 +0.3 +0.1
auxotrophy YNB Glucose 75mM Arginine N.D. +0.8 +0.2 -0.4 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.2 +0.6 -0.3 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.2 +0.4 +0.4 +0.2
growth on ricinoleic acid YNB Glucose N.D. -0.0 +0.5 +0.7 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.7 -0.4 +1.1 +0.3
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