Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11986 and 11987 are separated by 288 nucleotides11987 and 11988 are separated by 306 nucleotides11988 and 11989 are separated by 183 nucleotides11989 and 11990 are separated by 534 nucleotides mRNA_3618: 11986 - HMMPfam-Cupin domain-PF07883,SUPERFAMILY--SSF51182, at 178,257 to 178,945 11986 mRNA_3619: 11987 - HMMPfam-X-Pro dipeptidyl-peptidase (S15 family)-PF02129,HMMPfam-X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain-PF08530,SMART-X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain-SM00939,SUPERFAMILY--SSF49785,SUPERFAMILY--SSF53474,TIGRFAM-/NonD hydrolase CocE/NonD family protein-TIGR00976, at 179,234 to 181,455 11987 mRNA_3620: 11988 - K15777 DOPA 4,5-DOPA dioxygenase extradiol, at 181,762 to 183,020 11988 mRNA_3621: 11989 - K00252 GCDH, gcdH glutaryl-CoA dehydrogenase, at 183,204 to 185,483 11989 mRNA_3622: 11990 - KOG0254 Predicted transporter (major facilitator superfamily), at 186,018 to 188,381 11990
Group Condition mRNA_3618 mRNA_3619 mRNA_3620 mRNA_3621 mRNA_3622
11986 11987 11988 11989 11990
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.9 -0.3 +0.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 +0.3 +0.1 -0.5 -1.4
growth on oleic acid YNB Oleic Acid -0.3 +0.2 +0.2 -0.2 -1.1
growth on oleic acid YNB Glucose -0.1 -0.2 +0.2 -0.4 -0.3
auxotrophy YNB Glucose +0.1 -0.5 -0.1 -0.3 +0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.2 -0.3 -0.0 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.8 +0.2 -0.1 +0.0
auxotrophy Dropout Complete +0.1 -0.5 -0.0 -0.1 +0.0
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.4 +0.1 -0.2 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 +0.4 +0.2 -0.3 -0.9
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.3 -0.0 -0.2 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 +0.3 +0.2 -0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.0 -0.3 +0.5 +0.1
growth on ypd YPD +0.5 -0.0 -0.2 +0.3 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 -0.1 +0.0 -0.1 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.3 -0.0 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 -0.4 +0.3 +0.0 +0.2
growth on ricinoleic acid YNB Glucose +0.5 +0.7 -0.1 -0.4 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.6 -0.3 +0.3 +0.3 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 +1.1 +0.3 -0.2 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.5 +0.1 +0.1 +0.5 +0.3
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