Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11988 and 11989 are separated by 183 nucleotides11989 and 11990 are separated by 534 nucleotides11990 and 11991 are separated by 1876 nucleotides11991 and 11992 are separated by 689 nucleotides mRNA_3620: 11988 - K15777 DOPA 4,5-DOPA dioxygenase extradiol, at 181,762 to 183,020 11988 mRNA_3621: 11989 - K00252 GCDH, gcdH glutaryl-CoA dehydrogenase, at 183,204 to 185,483 11989 mRNA_3622: 11990 - KOG0254 Predicted transporter (major facilitator superfamily), at 186,018 to 188,381 11990 mRNA_3623: 11991 - HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 190,258 to 192,689 11991 mRNA_3624: 11992 - SUPERFAMILY--SSF52047, at 193,379 to 194,590 11992
Group Condition mRNA_3620 mRNA_3621 mRNA_3622 mRNA_3623 mRNA_3624
11988 11989 11990 11991 11992
growth on oleic acid YNB Oleic Acid +0.2 -0.2 -1.1 -0.5 -0.7
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.3 -0.9 -0.1 -0.7
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.0 -0.1 +0.1 -1.4
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.5 -1.4 -0.3 +0.6
growth on oleic acid YNB Glucose +0.2 -0.4 -0.3 -0.2 -0.3
growth on ricinoleic acid YNB Glucose -0.1 -0.4 +0.1 -0.1 -0.5
auxotrophy YNB Glucose -0.1 -0.3 +0.0 -0.3 +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.3 +0.5 +0.1 +0.3 -1.1
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.2 +0.1 +0.4 -0.7
growth on ypd YPD -0.2 +0.3 -0.1 +0.2 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.2 -0.1 +0.8 -0.6
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.2 +0.1 +0.4 -0.4
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.2 -0.0 -0.0 +0.7
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.1 +0.0 -0.1 +0.5
auxotrophy Dropout Complete -0.0 -0.1 +0.0 -0.4 +1.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 -0.1 +0.2 +0.1 +0.7
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 -0.2 +0.3 +1.0 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 +0.3 +0.1 -0.1 +0.4
ypd buoyancy 40 hrs Low Buoyancy +0.3 +0.2 -0.0 +0.5 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.5 +0.3 -0.1 +0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.0 +0.2 +0.5 +1.0
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