Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 11991 and 11992 are separated by 689 nucleotides11992 and 11993 are separated by 251 nucleotides11993 and 11994 are separated by 391 nucleotides11994 and 11995 are separated by 895 nucleotides mRNA_3623: 11991 - HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 190,258 to 192,689 11991 mRNA_3624: 11992 - SUPERFAMILY--SSF52047, at 193,379 to 194,590 11992 mRNA_3625: 11993 - K01176 AMY, amyA, malS alpha-amylase, at 194,842 to 197,624 11993 mRNA_3626: 11994 - BLAST SH3 domain-containing protein [Rhizoctonia solani AG-..., at 198,016 to 198,652 11994 mRNA_3627: 11995 - SUPERFAMILY--SSF51110,SUPERFAMILY--SSF51126, at 199,548 to 202,220 11995
Group Condition mRNA_3623 mRNA_3624 mRNA_3625 mRNA_3626 mRNA_3627
11991 11992 11993 11994 11995
facs on lipid accumulation Sorted No BODIPY Gate +0.3 -1.1 -0.2 -0.4 -0.5
growth on oleic acid YNB Oleic Acid -0.5 -0.7 +0.2 -0.4 -0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -1.4 -0.3 +0.2 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.4 +0.1 -1.3 -0.3
growth on oleic acid YNB Glucose -0.2 -0.3 +0.2 +0.0 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate +0.8 -0.6 -0.0 -0.3 -0.4
growth on ricinoleic acid YNB Glucose -0.1 -0.5 +0.1 +0.3 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.7 -0.0 +0.3 +0.2
auxotrophy YNB Glucose -0.3 +0.0 -0.1 +0.3 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.6 +0.2 -0.2 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.6 +0.1 +0.2 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation +1.0 -0.5 -0.7 +0.6 +0.2
growth on ypd YPD +0.2 -0.6 +0.4 +1.0 -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.4 -0.4 +0.3 +0.5 +0.3
ypd buoyancy 40 hrs High Buoyancy +0.4 -0.7 +0.6 +0.5 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.7 +0.3 +0.3 -0.1
auxotrophy Dropout Complete -0.4 +1.3 -0.4 +0.8 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.0 +0.7 +0.2 +0.5 +0.0
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.5 +0.0 +0.8 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.5 +0.0 +0.6 +0.4 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 +1.0 +0.5 +0.2 -0.1
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