Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11992 and 11993 are separated by 251 nucleotides11993 and 11994 are separated by 391 nucleotides11994 and 11995 are separated by 895 nucleotides11995 and 11996 are separated by 393 nucleotides mRNA_3624: 11992 - SUPERFAMILY--SSF52047, at 193,379 to 194,590 11992 mRNA_3625: 11993 - K01176 AMY, amyA, malS alpha-amylase, at 194,842 to 197,624 11993 mRNA_3626: 11994 - BLAST SH3 domain-containing protein [Rhizoctonia solani AG-..., at 198,016 to 198,652 11994 mRNA_3627: 11995 - SUPERFAMILY--SSF51110,SUPERFAMILY--SSF51126, at 199,548 to 202,220 11995 mRNA_3628: 11996 - K10849 ERCC1 DNA excision repair protein ERCC-1, at 202,614 to 203,898 11996
Group Condition mRNA_3624 mRNA_3625 mRNA_3626 mRNA_3627 mRNA_3628
11992 11993 11994 11995 11996
facs on lipid accumulation Sorted High BODIPY Gate -1.4 -0.3 +0.2 -0.3 -1.2
facs on lipid accumulation Sorted No BODIPY Gate -1.1 -0.2 -0.4 -0.5 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -0.0 -0.3 -0.4 -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.4 +0.1 -1.3 -0.3 +0.0
growth on oleic acid YNB Oleic Acid -0.7 +0.2 -0.4 -0.3 +0.4
growth on oleic acid YNB Glucose -0.3 +0.2 +0.0 -0.5 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -0.7 +0.6 +0.2 +0.1
growth on ricinoleic acid YNB Glucose -0.5 +0.1 +0.3 -0.2 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.7 -0.0 +0.3 +0.2 +0.3
auxotrophy YNB Glucose +0.0 -0.1 +0.3 +0.1 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.4 +0.3 +0.5 +0.3 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.6 +0.2 -0.2 -0.0 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.7 +0.6 +0.5 +0.3 -0.0
growth on ypd YPD -0.6 +0.4 +1.0 -0.3 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.6 +0.1 +0.2 -0.2 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.0 +0.6 +0.4 +0.3 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.7 +0.3 +0.3 -0.1 +0.2
auxotrophy YNB Glucose 75mM Arginine +0.7 +0.2 +0.5 +0.0 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +1.0 +0.5 +0.2 -0.1 -0.0
auxotrophy YNB Glucose 75mM Methionine +0.5 +0.0 +0.8 +0.2 +0.2
auxotrophy Dropout Complete +1.3 -0.4 +0.8 -0.0 +0.1
remove
mRNA_3624
plot
remove
mRNA_3625
plot
remove
mRNA_3626
remove
mRNA_3627
plot
remove
mRNA_3628
plot