Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 11993 and 11994 are separated by 391 nucleotides11994 and 11995 are separated by 895 nucleotides11995 and 11996 are separated by 393 nucleotides11996 and 11997 are separated by 84 nucleotides mRNA_3625: 11993 - K01176 AMY, amyA, malS alpha-amylase, at 194,842 to 197,624 11993 mRNA_3626: 11994 - BLAST SH3 domain-containing protein [Rhizoctonia solani AG-..., at 198,016 to 198,652 11994 mRNA_3627: 11995 - SUPERFAMILY--SSF51110,SUPERFAMILY--SSF51126, at 199,548 to 202,220 11995 mRNA_3628: 11996 - K10849 ERCC1 DNA excision repair protein ERCC-1, at 202,614 to 203,898 11996 mRNA_3629: 11997 - Hypothetical Protein, at 203,983 to 204,971 11997
Group Condition mRNA_3625 mRNA_3626 mRNA_3627 mRNA_3628 mRNA_3629
11993 11994 11995 11996 11997
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.3 -0.4 -0.6 -1.0
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.4 -0.5 -0.5 -0.6
facs on lipid accumulation Sorted High BODIPY Gate -0.3 +0.2 -0.3 -1.2 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -1.3 -0.3 +0.0 +0.0
growth on oleic acid YNB Oleic Acid +0.2 -0.4 -0.3 +0.4 -0.4
growth on oleic acid YNB Glucose +0.2 +0.0 -0.5 +0.3 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.2 -0.0 -0.1 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 +0.6 +0.2 +0.1 -0.3
auxotrophy Dropout Complete -0.4 +0.8 -0.0 +0.1 -0.5
auxotrophy YNB Glucose -0.1 +0.3 +0.1 +0.1 -0.4
growth on ricinoleic acid YNB Glucose +0.1 +0.3 -0.2 +0.2 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.2 -0.2 +0.1 +0.0
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.5 +0.0 -0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.6 +0.4 +0.3 -0.3 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 +0.2 -0.1 -0.0 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.3 -0.1 +0.2 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.3 +0.5 +0.3 -0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 +0.3 +0.2 +0.3 +0.3
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.8 +0.2 +0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.6 +0.5 +0.3 -0.0 -0.3
growth on ypd YPD +0.4 +1.0 -0.3 +0.3 +0.9
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