Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11994 and 11995 are separated by 895 nucleotides
11995 and 11996 are separated by 393 nucleotides
11996 and 11997 are separated by 84 nucleotides
11997 and 11998 are separated by 660 nucleotides
mRNA_3626: 11994 - BLAST SH3 domain-containing protein [Rhizoctonia solani AG-..., at 198,016 to 198,652
11994
mRNA_3627: 11995 - SUPERFAMILY--SSF51110,SUPERFAMILY--SSF51126, at 199,548 to 202,220
11995
mRNA_3628: 11996 - K10849 ERCC1 DNA excision repair protein ERCC-1, at 202,614 to 203,898
11996
mRNA_3629: 11997 - Hypothetical Protein, at 203,983 to 204,971
11997
mRNA_3630: 11998 - Hypothetical Protein, at 205,632 to 206,590
11998
Group
Condition
mRNA
_3626
mRNA
_3627
mRNA
_3628
mRNA
_3629
mRNA
_3630
11994
11995
11996
11997
11998
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-0.4
-0.6
-1.0
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-1.3
-0.3
+0.0
+0.0
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
-0.5
-0.5
-0.6
+0.4
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
-0.3
-1.2
-0.2
+0.2
growth on oleic acid
YNB Oleic Acid
-0.4
-0.3
+0.4
-0.4
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.0
-0.1
-0.2
-0.3
growth on oleic acid
YNB Glucose
+0.0
-0.5
+0.3
-0.4
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.6
+0.2
+0.1
-0.3
-1.1
auxotrophy
YNB Glucose
+0.3
+0.1
+0.1
-0.4
+0.0
growth on ricinoleic acid
YNB Glucose
+0.3
-0.2
+0.2
+0.0
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
-0.1
-0.0
+0.0
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
-0.2
+0.1
+0.0
-0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.4
+0.3
-0.3
-0.4
+0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
-0.1
+0.2
+0.1
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.5
+0.0
-0.1
-0.2
+0.3
auxotrophy
Dropout Complete
+0.8
-0.0
+0.1
-0.5
+0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.5
+0.3
-0.1
-0.1
+0.1
ypd buoyancy
40 hrs High Buoyancy
+0.5
+0.3
-0.0
-0.3
+0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.8
+0.2
+0.2
-0.2
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
+0.2
+0.3
+0.3
+0.1
growth on ypd
YPD
+1.0
-0.3
+0.3
+0.9
+0.6
remove
mRNA_3626
plot
remove
mRNA_3627
plot
remove
mRNA_3628
remove
mRNA_3629
plot
remove
mRNA_3630
plot