Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 11994 and 11995 are separated by 895 nucleotides11995 and 11996 are separated by 393 nucleotides11996 and 11997 are separated by 84 nucleotides11997 and 11998 are separated by 660 nucleotides mRNA_3626: 11994 - BLAST SH3 domain-containing protein [Rhizoctonia solani AG-..., at 198,016 to 198,652 11994 mRNA_3627: 11995 - SUPERFAMILY--SSF51110,SUPERFAMILY--SSF51126, at 199,548 to 202,220 11995 mRNA_3628: 11996 - K10849 ERCC1 DNA excision repair protein ERCC-1, at 202,614 to 203,898 11996 mRNA_3629: 11997 - Hypothetical Protein, at 203,983 to 204,971 11997 mRNA_3630: 11998 - Hypothetical Protein, at 205,632 to 206,590 11998
Group Condition mRNA_3626 mRNA_3627 mRNA_3628 mRNA_3629 mRNA_3630
11994 11995 11996 11997 11998
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.4 -0.6 -1.0 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.3 -0.3 +0.0 +0.0 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.4 -0.5 -0.5 -0.6 +0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.3 -1.2 -0.2 +0.2
growth on oleic acid YNB Oleic Acid -0.4 -0.3 +0.4 -0.4 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.0 -0.1 -0.2 -0.3
growth on oleic acid YNB Glucose +0.0 -0.5 +0.3 -0.4 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.6 +0.2 +0.1 -0.3 -1.1
auxotrophy YNB Glucose +0.3 +0.1 +0.1 -0.4 +0.0
growth on ricinoleic acid YNB Glucose +0.3 -0.2 +0.2 +0.0 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.1 -0.0 +0.0 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.2 +0.1 +0.0 -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.4 +0.3 -0.3 -0.4 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.1 +0.2 +0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine +0.5 +0.0 -0.1 -0.2 +0.3
auxotrophy Dropout Complete +0.8 -0.0 +0.1 -0.5 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.5 +0.3 -0.1 -0.1 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.5 +0.3 -0.0 -0.3 +0.3
auxotrophy YNB Glucose 75mM Methionine +0.8 +0.2 +0.2 -0.2 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +0.2 +0.3 +0.3 +0.1
growth on ypd YPD +1.0 -0.3 +0.3 +0.9 +0.6
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