Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11995 and 11996 are separated by 393 nucleotides
11996 and 11997 are separated by 84 nucleotides
11997 and 11998 are separated by 660 nucleotides
11998 and 11999 are separated by 365 nucleotides
mRNA_3627: 11995 - SUPERFAMILY--SSF51110,SUPERFAMILY--SSF51126, at 199,548 to 202,220
11995
mRNA_3628: 11996 - K10849 ERCC1 DNA excision repair protein ERCC-1, at 202,614 to 203,898
11996
mRNA_3629: 11997 - Hypothetical Protein, at 203,983 to 204,971
11997
mRNA_3630: 11998 - Hypothetical Protein, at 205,632 to 206,590
11998
mRNA_3631: 11999 - Hypothetical Protein, at 206,956 to 207,306
11999
Group
Condition
mRNA
_3627
mRNA
_3628
mRNA
_3629
mRNA
_3630
mRNA
_3631
11995
11996
11997
11998
11999
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
+0.0
+0.0
-0.4
-2.6
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
-0.6
-1.0
+0.0
-0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.2
+0.2
-0.2
+0.0
-1.5
growth on oleic acid
YNB Glucose
-0.5
+0.3
-0.4
-0.1
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.0
+0.0
+0.1
-1.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
-0.1
-0.2
-0.3
-0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.3
-0.3
-0.4
+0.4
-0.8
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
+0.1
-0.3
-1.1
+0.3
auxotrophy
YNB Glucose 75mM Arginine
+0.0
-0.1
-0.2
+0.3
-0.7
auxotrophy
Dropout Complete
-0.0
+0.1
-0.5
+0.2
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-1.2
-0.2
+0.2
+0.7
auxotrophy
YNB Glucose
+0.1
+0.1
-0.4
+0.0
-0.6
facs on lipid accumulation
Sorted No BODIPY Gate
-0.5
-0.5
-0.6
+0.4
+0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
+0.1
+0.0
-0.0
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.2
+0.1
-0.2
-0.4
growth on ricinoleic acid
YNB Glucose
-0.2
+0.2
+0.0
-0.1
-0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.3
-0.1
-0.1
+0.1
-0.1
growth on oleic acid
YNB Oleic Acid
-0.3
+0.4
-0.4
-0.1
+0.8
ypd buoyancy
40 hrs High Buoyancy
+0.3
-0.0
-0.3
+0.3
+0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
+0.3
+0.3
+0.1
+0.5
growth on ypd
YPD
-0.3
+0.3
+0.9
+0.6
+2.1
remove
mRNA_3627
plot
remove
mRNA_3628
plot
remove
mRNA_3629
remove
mRNA_3630
plot
remove
mRNA_3631
plot