Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 11997 and 11998 are separated by 660 nucleotides11998 and 11999 are separated by 365 nucleotides11999 and 12000 are separated by 382 nucleotides12000 and 12001 are separated by 1483 nucleotides mRNA_3629: 11997 - Hypothetical Protein, at 203,983 to 204,971 11997 mRNA_3630: 11998 - Hypothetical Protein, at 205,632 to 206,590 11998 mRNA_3631: 11999 - Hypothetical Protein, at 206,956 to 207,306 11999 mRNA_3632: 12000 - HMMPfam-Protein kinase domain-PF00069,ProSitePatterns-Serine/Threonine protein kinases active-site signature.-PS00108,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112, at 207,689 to 209,563 12000 mRNA_3633: 12001 - KOG1074 Transcriptional repressor SALM, at 211,047 to 213,295 12001
Group Condition mRNA_3629 mRNA_3630 mRNA_3631 mRNA_3632 mRNA_3633
11997 11998 11999 12000 12001
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 -0.4 -2.6 +0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.0 -1.5 -0.4 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -1.0 +0.0 -0.3 -0.4 -0.2
auxotrophy Dropout Complete -0.5 +0.2 -0.5 -0.4 -0.3
auxotrophy YNB Glucose -0.4 +0.0 -0.6 -0.1 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.3 -0.7 -0.4 -0.4
growth on oleic acid YNB Glucose -0.4 -0.1 -0.3 -0.0 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 +0.1 -1.0 -0.3 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 -0.0 -0.5 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.2 -0.4 -0.1 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.4 +0.4 -0.8 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.3 -0.3 +0.1 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -1.1 +0.3 +0.6 +0.3
growth on ricinoleic acid YNB Glucose +0.0 -0.1 -0.2 +0.1 -0.0
growth on oleic acid YNB Oleic Acid -0.4 -0.1 +0.8 -0.1 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.2 +0.7 -0.6 +0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.1 -0.1 +0.3 +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.6 +0.4 +0.6 -0.3 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +0.1 +0.5 -0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.3 +0.3 +0.6 +0.3 -0.0
growth on ypd YPD +0.9 +0.6 +2.1 +0.4 +0.5
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