Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11997 and 11998 are separated by 660 nucleotides
11998 and 11999 are separated by 365 nucleotides
11999 and 12000 are separated by 382 nucleotides
12000 and 12001 are separated by 1483 nucleotides
mRNA_3629: 11997 - Hypothetical Protein, at 203,983 to 204,971
11997
mRNA_3630: 11998 - Hypothetical Protein, at 205,632 to 206,590
11998
mRNA_3631: 11999 - Hypothetical Protein, at 206,956 to 207,306
11999
mRNA_3632: 12000 - HMMPfam-Protein kinase domain-PF00069,ProSitePatterns-Serine/Threonine protein kinases active-site signature.-PS00108,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112, at 207,689 to 209,563
12000
mRNA_3633: 12001 - KOG1074 Transcriptional repressor SALM, at 211,047 to 213,295
12001
Group
Condition
mRNA
_3629
mRNA
_3630
mRNA
_3631
mRNA
_3632
mRNA
_3633
11997
11998
11999
12000
12001
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
-0.4
-2.6
+0.1
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.2
+0.0
-1.5
-0.4
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.0
+0.0
-0.3
-0.4
-0.2
auxotrophy
Dropout Complete
-0.5
+0.2
-0.5
-0.4
-0.3
auxotrophy
YNB Glucose
-0.4
+0.0
-0.6
-0.1
-0.4
auxotrophy
YNB Glucose 75mM Arginine
-0.2
+0.3
-0.7
-0.4
-0.4
growth on oleic acid
YNB Glucose
-0.4
-0.1
-0.3
-0.0
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
+0.1
-1.0
-0.3
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
-0.0
-0.5
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.2
-0.4
-0.1
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.4
+0.4
-0.8
+0.2
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.3
-0.3
+0.1
+0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-1.1
+0.3
+0.6
+0.3
growth on ricinoleic acid
YNB Glucose
+0.0
-0.1
-0.2
+0.1
-0.0
growth on oleic acid
YNB Oleic Acid
-0.4
-0.1
+0.8
-0.1
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
+0.2
+0.7
-0.6
+0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.1
-0.1
+0.3
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.6
+0.4
+0.6
-0.3
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
+0.1
+0.5
-0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.3
+0.3
+0.6
+0.3
-0.0
growth on ypd
YPD
+0.9
+0.6
+2.1
+0.4
+0.5
remove
mRNA_3629
plot
remove
mRNA_3630
plot
remove
mRNA_3631
remove
mRNA_3632
plot
remove
mRNA_3633
plot