Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12002 and 12003 are separated by 162 nucleotides12003 and 12004 are separated by 883 nucleotides12004 and 12005 are separated by 241 nucleotides12005 and 12006 are separated by 812 nucleotides mRNA_3634: 12002 - KOG2456 Aldehyde dehydrogenase, at 213,705 to 215,567 12002 mRNA_3635: 12003 - BLAST similar to An07g01410 [Aspergillus kawachii IFO 4308], at 215,730 to 216,270 12003 mRNA_3636: 12004 - K03238 EIF2S2 translation initiation factor 2 subunit 2, at 217,154 to 218,587 12004 mRNA_3637: 12005 - KOG0730 AAA+-type ATPase, at 218,829 to 220,926 12005 mRNA_3638: 12006 - KOG1721 FOG Zn-finger, at 221,739 to 224,481 12006
Group Condition mRNA_3634 mRNA_3635 mRNA_3636 mRNA_3637 mRNA_3638
12002 12003 12004 12005 12006
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.7 N.D. -0.4 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 -0.5 N.D. -0.7 -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 -0.1 N.D. -0.1 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.4 N.D. -0.0 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.3 N.D. +0.0 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 +0.3 N.D. +0.2 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 -0.1 N.D. -0.2 -0.4
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.0 N.D. -0.1 -0.2
growth on oleic acid YNB Glucose +0.0 -0.1 N.D. -0.0 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 -0.3 N.D. -0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.1 N.D. -0.1 -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.3 N.D. +0.2 -0.2
growth on oleic acid YNB Oleic Acid -0.0 +0.3 N.D. -0.2 +0.0
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.1 N.D. +0.1 +0.0
growth on ypd YPD +0.1 +0.5 N.D. -0.3 -0.1
growth on ricinoleic acid YNB Glucose +0.3 +0.3 N.D. +0.1 -0.4
auxotrophy YNB Glucose 75mM Methionine -0.0 +0.4 N.D. +0.3 -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.5 N.D. +0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.3 +0.5 N.D. +0.3 -0.1
auxotrophy YNB Glucose +0.3 +0.4 N.D. +0.2 -0.0
auxotrophy Dropout Complete +0.2 +0.7 N.D. +0.4 -0.2
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