Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12004 and 12005 are separated by 241 nucleotides12005 and 12006 are separated by 812 nucleotides12006 and 12007 are separated by 1201 nucleotides12007 and 12008 are separated by 784 nucleotides mRNA_3636: 12004 - K03238 EIF2S2 translation initiation factor 2 subunit 2, at 217,154 to 218,587 12004 mRNA_3637: 12005 - KOG0730 AAA+-type ATPase, at 218,829 to 220,926 12005 mRNA_3638: 12006 - KOG1721 FOG Zn-finger, at 221,739 to 224,481 12006 mRNA_3639: 12007 - K11204 GCLC glutamate--cysteine ligase catalytic subunit, at 225,683 to 228,983 12007 mRNA_3640: 12008 - ProSiteProfiles-Zinc finger SWIM-type profile.-PS50966, at 229,768 to 230,624 12008
Group Condition mRNA_3636 mRNA_3637 mRNA_3638 mRNA_3639 mRNA_3640
12004 12005 12006 12007 12008
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.7 -0.6 -2.2 +0.0
growth on ypd YPD N.D. -0.3 -0.1 -2.4 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.4 -0.2 -1.6 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.2 -0.3 -2.0 +0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 -0.2 -1.2 +0.2
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 -0.2 -0.9 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.1 -0.4 -0.6 +0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.1 -0.1 -0.9 -0.0
growth on oleic acid YNB Glucose N.D. -0.0 -0.1 -0.8 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.0 -0.2 -0.7 +0.1
auxotrophy YNB Glucose 75mM Arginine N.D. +0.3 -0.1 -0.5 +0.3
ypd buoyancy 40 hrs High Buoyancy N.D. +0.1 +0.0 -0.1 +0.0
auxotrophy YNB Glucose N.D. +0.2 -0.0 -0.3 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.0 -0.2 +0.3 +0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.2 -0.2 +0.2 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.2 -0.4 +0.9 +0.5
auxotrophy YNB Glucose 75mM Methionine N.D. +0.3 -0.2 +0.6 +0.3
auxotrophy Dropout Complete N.D. +0.4 -0.2 +1.0 +0.3
growth on ricinoleic acid YNB Glucose N.D. +0.1 -0.4 +1.7 +0.1
growth on oleic acid YNB Oleic Acid N.D. -0.2 +0.0 +1.4 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.1 -0.1 +1.7 +0.3
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