Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12008 and 12009 are separated by 33 nucleotides12009 and 12010 are separated by 264 nucleotides12010 and 12011 are separated by 487 nucleotides12011 and 12012 are separated by 1327 nucleotides mRNA_3640: 12008 - ProSiteProfiles-Zinc finger SWIM-type profile.-PS50966, at 229,768 to 230,624 12008 mRNA_3641: 12009 - K17615 PPG1 serine/threonine-protein phosphatase PPG1, at 230,658 to 231,997 12009 mRNA_3642: 12010 - K08818 CDC2L cell division cycle 2-like, at 232,262 to 233,977 12010 mRNA_3643: 12011 - HMMPfam-Protein of unknown function (DUF1765)-PF08578, at 234,465 to 241,327 12011 mRNA_3644: 12012 - Hypothetical Protein, at 242,655 to 243,950 12012
Group Condition mRNA_3640 mRNA_3641 mRNA_3642 mRNA_3643 mRNA_3644
12008 12009 12010 12011 12012
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 -4.2 N.D. -0.1 +0.7
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -2.7 N.D. +0.0 +0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -1.8 N.D. -0.0 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 -1.7 N.D. -0.3 +0.7
ypd buoyancy 40 hrs Low Buoyancy +0.0 -1.1 N.D. -0.1 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.1 N.D. +0.1 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 -0.3 N.D. -0.3 -0.0
growth on ypd YPD +0.1 -0.6 N.D. -0.2 +0.7
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.3 N.D. +0.0 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 +0.2 N.D. -0.6 +0.1
auxotrophy YNB Glucose +0.2 -0.0 N.D. +0.0 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.3 N.D. -0.1 +0.5
auxotrophy Dropout Complete +0.3 +0.2 N.D. -0.2 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.2 N.D. -0.0 +0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.4 N.D. -0.2 +0.3
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.2 N.D. +0.0 +0.2
auxotrophy YNB Glucose 75mM Arginine +0.3 +0.2 N.D. -0.0 +0.3
growth on ricinoleic acid YNB Glucose +0.1 +0.6 N.D. +0.2 -0.1
growth on oleic acid YNB Glucose +0.0 +0.9 N.D. +0.0 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.7 N.D. -0.2 +0.7
growth on oleic acid YNB Oleic Acid +0.4 +1.9 N.D. -0.2 +0.5
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